Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

Click here to switch to the map view.

The map label for this gene is yvlB [H]

Identifier: 116494449

GI number: 116494449

Start: 921123

End: 922604

Strand: Direct

Name: yvlB [H]

Synonym: LSEI_0942

Alternate gene names: 116494449

Gene position: 921123-922604 (Clockwise)

Preceding gene: 116494448

Following gene: 116494450

Centisome position: 31.81

GC content: 46.96

Gene sequence:

>1482_bases
ATGAATGAACGCGAAAGAATTTTAGACCTAGTTAAAAAAGGCGTTATTTCAAGCGAAGAGGCGCTGGTACTTTTGGAAAA
CCTGGCGAAACGTCAAGGTTCCCAGCAGGCCGCTAGCCCGGCCGATAACACAGCTCCCGAAGAAACTTCGGAAACGCCGA
ATACGGATGATGAGCATGCAACCAGTGACACGGATCGCAATGAAGCGCTGACAGAACTCAACACTGAGATTGCTGAAGCA
GCAGGTGCCTTAGATGCTGCTACCGCACAGGTTACAACTATTGGTAAACAAATCGATGCGAACAACGAACAGATCATCGT
GCTGGACACGATGGAAGATCTCGAAGCCCTTTCCCCGGAAAAATACCAAAAGCGCGGGGATTTGAAACAGGAGAATCAGA
AACTGACTGATCAGTTGGCCGAACTAAAAGGCCAAATTGAGTCTCTGAAAGCGAACCTTGCCGGCTTACGTCACCAAAAG
CATGATTTAGAGCGTAAGAAGCTTGGCGACAAGATTTTAAATGACGATTGGCAAAAAGATGCTCGCGATGCTTTTTCTGA
GTTTGGCAAAAACTTAGGTGATGCAACCACGCAACTGGGTGGGTTCGTGAAGGATACTGTCAACAATGTTTTGGATAACG
TTGACTGGAAGAATGTCACCATTACAGTACCCGGTTTAGCAACTGAAAAATTTGACCATGTTTTCGATTTTCCAGATAGT
CAGGCAACGATTCTTGATGTGAAAGTTGCTAATGGTGACGTGAAGTTCAAGACTTGGGATCAGCCAGGTATTCAAGTTGC
TGCTGCGATTAAGTTGTACGGCAAAATGGATGCCGCATCGCCGCTGGATGCGTTCAAAGACCGGAGCCGCATTGATGTCA
CGGACGATCATTTTAGCTTCCAAGTACCAAACAAGCGGGTTCAAGCTGATTTGGTCATCTCATTGCCAAAGCGCAGTTAT
GATCATGTTGCTGTCCGGTTATTAAATGGCAGTGCAGACTTAACTGGCATTACCGGTAAAGATTTCTATGTTAAGAGTAC
AAATGGTCAGATGAACTTCACTCATGTTGATGGTGTCATGATCGAGAGTGAAGGTGTCAACGGCTCAATCAAGGTTCAAG
GTGGTCATACCCATGACTTGTTGCTCACAACAGTGAATGGCGATGTCAGTGTTGATGCCGATCCGGCAACGGCCGCCTTA
AAGACAGTTAACGGGACTGTGCGAGCTACCTATCACACGGACTTCACGACGCTTGAAGGCACTTCGATGAACGGCAATGT
TAAAGTCGCCGTGCCGTCCTCCATTGCGCTTAACGGCGAGGTTCGGACGCATTTTGGCAGCATCAAGAGCCGCTTGAGTG
AAGTTGCCGAACCAGCTAAGGGGATTAAGCGTCTGGAACTGATGCGTCCCGGGACTGGCAGTAGTGAAATGAAACTCAAT
ACAACCAGTGGTAACATTCAATTAAAAGATTCAAATGACTGA

Upstream 100 bases:

>100_bases
TCCGTCTTCCGACCCGTTCAAAAATCAACCTTTGGACCTATGCGCCCCGGCGCGAATCCGTGCATACTAATCATGTAATC
AAATCCTGGAGGGATAACCC

Downstream 100 bases:

>100_bases
GGGGATTGCTTATGCCTTTTCTATTAATTCCATTAATGTTCTTTATCATTGGCTTGATCATCGTGGCGGTTTTTGCCATC
GGGATATTTCTGCTGAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MNERERILDLVKKGVISSEEALVLLENLAKRQGSQQAASPADNTAPEETSETPNTDDEHATSDTDRNEALTELNTEIAEA
AGALDAATAQVTTIGKQIDANNEQIIVLDTMEDLEALSPEKYQKRGDLKQENQKLTDQLAELKGQIESLKANLAGLRHQK
HDLERKKLGDKILNDDWQKDARDAFSEFGKNLGDATTQLGGFVKDTVNNVLDNVDWKNVTITVPGLATEKFDHVFDFPDS
QATILDVKVANGDVKFKTWDQPGIQVAAAIKLYGKMDAASPLDAFKDRSRIDVTDDHFSFQVPNKRVQADLVISLPKRSY
DHVAVRLLNGSADLTGITGKDFYVKSTNGQMNFTHVDGVMIESEGVNGSIKVQGGHTHDLLLTTVNGDVSVDADPATAAL
KTVNGTVRATYHTDFTTLEGTSMNGNVKVAVPSSIALNGEVRTHFGSIKSRLSEVAEPAKGIKRLELMRPGTGSSEMKLN
TTSGNIQLKDSND

Sequences:

>Translated_493_residues
MNERERILDLVKKGVISSEEALVLLENLAKRQGSQQAASPADNTAPEETSETPNTDDEHATSDTDRNEALTELNTEIAEA
AGALDAATAQVTTIGKQIDANNEQIIVLDTMEDLEALSPEKYQKRGDLKQENQKLTDQLAELKGQIESLKANLAGLRHQK
HDLERKKLGDKILNDDWQKDARDAFSEFGKNLGDATTQLGGFVKDTVNNVLDNVDWKNVTITVPGLATEKFDHVFDFPDS
QATILDVKVANGDVKFKTWDQPGIQVAAAIKLYGKMDAASPLDAFKDRSRIDVTDDHFSFQVPNKRVQADLVISLPKRSY
DHVAVRLLNGSADLTGITGKDFYVKSTNGQMNFTHVDGVMIESEGVNGSIKVQGGHTHDLLLTTVNGDVSVDADPATAAL
KTVNGTVRATYHTDFTTLEGTSMNGNVKVAVPSSIALNGEVRTHFGSIKSRLSEVAEPAKGIKRLELMRPGTGSSEMKLN
TTSGNIQLKDSND
>Mature_493_residues
MNERERILDLVKKGVISSEEALVLLENLAKRQGSQQAASPADNTAPEETSETPNTDDEHATSDTDRNEALTELNTEIAEA
AGALDAATAQVTTIGKQIDANNEQIIVLDTMEDLEALSPEKYQKRGDLKQENQKLTDQLAELKGQIESLKANLAGLRHQK
HDLERKKLGDKILNDDWQKDARDAFSEFGKNLGDATTQLGGFVKDTVNNVLDNVDWKNVTITVPGLATEKFDHVFDFPDS
QATILDVKVANGDVKFKTWDQPGIQVAAAIKLYGKMDAASPLDAFKDRSRIDVTDDHFSFQVPNKRVQADLVISLPKRSY
DHVAVRLLNGSADLTGITGKDFYVKSTNGQMNFTHVDGVMIESEGVNGSIKVQGGHTHDLLLTTVNGDVSVDADPATAAL
KTVNGTVRATYHTDFTTLEGTSMNGNVKVAVPSSIALNGEVRTHFGSIKSRLSEVAEPAKGIKRLELMRPGTGSSEMKLN
TTSGNIQLKDSND

Specific function: Unknown

COG id: COG3595

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016599 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53595; Mature: 53595

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNERERILDLVKKGVISSEEALVLLENLAKRQGSQQAASPADNTAPEETSETPNTDDEHA
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TSDTDRNEALTELNTEIAEAAGALDAATAQVTTIGKQIDANNEQIIVLDTMEDLEALSPE
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHCCCH
KYQKRGDLKQENQKLTDQLAELKGQIESLKANLAGLRHQKHDLERKKLGDKILNDDWQKD
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ARDAFSEFGKNLGDATTQLGGFVKDTVNNVLDNVDWKNVTITVPGLATEKFDHVFDFPDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCC
QATILDVKVANGDVKFKTWDQPGIQVAAAIKLYGKMDAASPLDAFKDRSRIDVTDDHFSF
CEEEEEEEEECCCEEEEECCCCCCEEEEEEEHHHCCCCCCCHHHHCCCCCCEECCCCEEE
QVPNKRVQADLVISLPKRSYDHVAVRLLNGSADLTGITGKDFYVKSTNGQMNFTHVDGVM
ECCCCCEEEEEEEECCCCCCCEEEEEEECCCCCEEECCCCCEEEECCCCEEEEEEECEEE
IESEGVNGSIKVQGGHTHDLLLTTVNGDVSVDADPATAALKTVNGTVRATYHTDFTTLEG
EEECCCCCEEEEECCCCEEEEEEEECCCEEECCCCHHHHHHCCCCEEEEEEECCCEEEEC
TSMNGNVKVAVPSSIALNGEVRTHFGSIKSRLSEVAEPAKGIKRLELMRPGTGSSEMKLN
CCCCCEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEE
TTSGNIQLKDSND
ECCCEEEEECCCC
>Mature Secondary Structure
MNERERILDLVKKGVISSEEALVLLENLAKRQGSQQAASPADNTAPEETSETPNTDDEHA
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TSDTDRNEALTELNTEIAEAAGALDAATAQVTTIGKQIDANNEQIIVLDTMEDLEALSPE
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHCCCH
KYQKRGDLKQENQKLTDQLAELKGQIESLKANLAGLRHQKHDLERKKLGDKILNDDWQKD
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ARDAFSEFGKNLGDATTQLGGFVKDTVNNVLDNVDWKNVTITVPGLATEKFDHVFDFPDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCC
QATILDVKVANGDVKFKTWDQPGIQVAAAIKLYGKMDAASPLDAFKDRSRIDVTDDHFSF
CEEEEEEEEECCCEEEEECCCCCCEEEEEEEHHHCCCCCCCHHHHCCCCCCEECCCCEEE
QVPNKRVQADLVISLPKRSYDHVAVRLLNGSADLTGITGKDFYVKSTNGQMNFTHVDGVM
ECCCCCEEEEEEEECCCCCCCEEEEEEECCCCCEEECCCCCEEEECCCCEEEEEEECEEE
IESEGVNGSIKVQGGHTHDLLLTTVNGDVSVDADPATAALKTVNGTVRATYHTDFTTLEG
EEECCCCCEEEEECCCCEEEEEEEECCCEEECCCCHHHHHHCCCCEEEEEEECCCEEEEC
TSMNGNVKVAVPSSIALNGEVRTHFGSIKSRLSEVAEPAKGIKRLELMRPGTGSSEMKLN
CCCCCEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEE
TTSGNIQLKDSND
ECCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]