| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is pstS1 [H]
Identifier: 116494443
GI number: 116494443
Start: 915540
End: 916400
Strand: Direct
Name: pstS1 [H]
Synonym: LSEI_0936
Alternate gene names: 116494443
Gene position: 915540-916400 (Clockwise)
Preceding gene: 116494442
Following gene: 116494444
Centisome position: 31.62
GC content: 48.2
Gene sequence:
>861_bases GTGAAAAAAATTGTGACCCTGTTGAGCCTGCTGTTTTTGCCACTGTTAATCAGTGCTTGCAACAGCAGCAGTCAACAGTC GGGAGAATCGATCACCGCAGTTGGATCAAGTGCCTTACAGCCCTTGGTTGAAGCGGCGGGTGAACAATATCAGACGGAAC ATTTGGGGGTCTTTATCAACGTCCAAGGCGGCGGGAGTGGCACAGGTTTAAGCCAGATCCAACAAGGTGCTGTGGACATT GGTAATTCAGATCTTTTTGCTGAAGAAAAAGCTGGTATCAAGGCCAAAGCATTGGTTGATCATAAGGTAGCAGTTGTCGG GATCGCCCCGATTGTGAATCCGAAGGTTGGCGTTAAAAACGTCTCGATGGCACAGCTGCAAAAAATCTTTCTTGGCGAAA TTACCAACTGGCAGCAGTTGGGCGGCAAAAATGTGCCGATTGTTCTAGTCAATCGAGCGCAAGGCTCAGGCACACGCGCG ACTTTTGAAAAATGCGTGATGCAAGGCAAACAGCCAATGGCCGCTCAGGAGCAGGATTCTACCGGGATGGTTCGACAAAT TGTCGGCAGTACGCCTGGTGCCATTTCTTATGTGGCGTTTTCGTACATTGATAAAACAGTTCAGGGGCTCTCAGTTGATG GCGTCGCACCCACGGATGCAAATGTCACGACCAATCAATGGCGCATTTGGTCGTACGAACATATGTATACGAAAGGGCAG CCAAAAGGACTCACTAAGAAATTTTTGGCTTATGTGATGTCACCAGCTATTCAGAAGAAGCTTGTTTTGAAAATGGGTTA CGTCCCGATGACACAAATGAAAGTGGTTCGGGACGCGAATGGCAAAGTGAGCAAGCAGTAA
Upstream 100 bases:
>100_bases AACCGCAGCCATCATGCCTTTACACAATCTTTACATTCAATGGCATGAACATTTACATGTAACTGATAAAATAATTGGAG CTTGAAATGGAGGATTTCGT
Downstream 100 bases:
>100_bases CCTGTGATGTTATCAAGACACGGTCAGATCCGTTGGCTGTGTCAGGTGTCGGACAGAAGCGTGATCTAATCCGGATAGAA ACCGATGTTGTGGTCTTCGC
Product: ABC-type phosphate transport system, periplasmic component
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKKIVTLLSLLFLPLLISACNSSSQQSGESITAVGSSALQPLVEAAGEQYQTEHLGVFINVQGGGSGTGLSQIQQGAVDI GNSDLFAEEKAGIKAKALVDHKVAVVGIAPIVNPKVGVKNVSMAQLQKIFLGEITNWQQLGGKNVPIVLVNRAQGSGTRA TFEKCVMQGKQPMAAQEQDSTGMVRQIVGSTPGAISYVAFSYIDKTVQGLSVDGVAPTDANVTTNQWRIWSYEHMYTKGQ PKGLTKKFLAYVMSPAIQKKLVLKMGYVPMTQMKVVRDANGKVSKQ
Sequences:
>Translated_286_residues MKKIVTLLSLLFLPLLISACNSSSQQSGESITAVGSSALQPLVEAAGEQYQTEHLGVFINVQGGGSGTGLSQIQQGAVDI GNSDLFAEEKAGIKAKALVDHKVAVVGIAPIVNPKVGVKNVSMAQLQKIFLGEITNWQQLGGKNVPIVLVNRAQGSGTRA TFEKCVMQGKQPMAAQEQDSTGMVRQIVGSTPGAISYVAFSYIDKTVQGLSVDGVAPTDANVTTNQWRIWSYEHMYTKGQ PKGLTKKFLAYVMSPAIQKKLVLKMGYVPMTQMKVVRDANGKVSKQ >Mature_286_residues MKKIVTLLSLLFLPLLISACNSSSQQSGESITAVGSSALQPLVEAAGEQYQTEHLGVFINVQGGGSGTGLSQIQQGAVDI GNSDLFAEEKAGIKAKALVDHKVAVVGIAPIVNPKVGVKNVSMAQLQKIFLGEITNWQQLGGKNVPIVLVNRAQGSGTRA TFEKCVMQGKQPMAAQEQDSTGMVRQIVGSTPGAISYVAFSYIDKTVQGLSVDGVAPTDANVTTNQWRIWSYEHMYTKGQ PKGLTKKFLAYVMSPAIQKKLVLKMGYVPMTQMKVVRDANGKVSKQ
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 30527; Mature: 30527
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIVTLLSLLFLPLLISACNSSSQQSGESITAVGSSALQPLVEAAGEQYQTEHLGVFIN CHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEHHHHHHHHHHHHHCCCCCCCCEEEEEEE VQGGGSGTGLSQIQQGAVDIGNSDLFAEEKAGIKAKALVDHKVAVVGIAPIVNPKVGVKN EECCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCEEEEHHCCEEEEEEEEECCCCCCCCCC VSMAQLQKIFLGEITNWQQLGGKNVPIVLVNRAQGSGTRATFEKCVMQGKQPMAAQEQDS CHHHHHHHHHHHCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCC TGMVRQIVGSTPGAISYVAFSYIDKTVQGLSVDGVAPTDANVTTNQWRIWSYEHMYTKGQ HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCEEEEEEHHHCCCCC PKGLTKKFLAYVMSPAIQKKLVLKMGYVPMTQMKVVRDANGKVSKQ CCCHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKKIVTLLSLLFLPLLISACNSSSQQSGESITAVGSSALQPLVEAAGEQYQTEHLGVFIN CHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEHHHHHHHHHHHHHCCCCCCCCEEEEEEE VQGGGSGTGLSQIQQGAVDIGNSDLFAEEKAGIKAKALVDHKVAVVGIAPIVNPKVGVKN EECCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCEEEEHHCCEEEEEEEEECCCCCCCCCC VSMAQLQKIFLGEITNWQQLGGKNVPIVLVNRAQGSGTRATFEKCVMQGKQPMAAQEQDS CHHHHHHHHHHHCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCC TGMVRQIVGSTPGAISYVAFSYIDKTVQGLSVDGVAPTDANVTTNQWRIWSYEHMYTKGQ HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCEEEEEEHHHCCCCC PKGLTKKFLAYVMSPAIQKKLVLKMGYVPMTQMKVVRDANGKVSKQ CCCHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12354221 [H]