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The map label for this gene is 116494431

Identifier: 116494431

GI number: 116494431

Start: 901273

End: 902844

Strand: Direct

Name: 116494431

Synonym: LSEI_0924

Alternate gene names: NA

Gene position: 901273-902844 (Clockwise)

Preceding gene: 116494430

Following gene: 116494433

Centisome position: 31.13

GC content: 48.09

Gene sequence:

>1572_bases
ATGAGTTCAGTAACACTGGTCTCAATAACCCTCGCAGCAGTCATCGCTTTAGCGGTCGGTTTATTGATCGGATTTGCACT
TCAAAAGAAGCTCCACCAGAACAATTTGGATCGAGCGACGCAGACAGCAGAAGGCATTATTGAGGCCGCTAAAAAAGAAG
CAGCGACTTTAAAAAAAGAAAAACTGCTGGAAGCAAAAGACGAGAATCATCGCTATCGAACCCAACTTGAAGATGAATTG
AAAGATCGGCGGACAGAAGTCCAGAAGTCGGAACATCGACTGAATCAGCGAGAGGATACTTTGGATCGGCGGGACGATAC
GCTAGATCGCAAGGAACAAAGTCTTGCTGACCGGGAAGCAAATTTGAACAAGCGGCAGCAACAGCTAGATGAACGTGAAC
AAGATATCTCTTCAGAAATCAGTAAACAGCACACAGAACTTGAACGGATCGCCGAGTTGACTCATGAACAGGCTCGGCAG
CAGATTCTTGACCAGACACAATCAGAACTGACGCATGAACGCGCCGTGATGATCAAAGAAAGCGAAGATGAAGCTAAGGA
AGCCGCGGATAAGAAAGCTAAAGTGTTGATCGCCGATGCGATTCAGCGCAGCGCTTCTGACATCGTTGCCGAAACGACAG
TGACCGTGGTGAACTTGCCAAATGACGACATGAAAGGCCGAATCATCGGCCGTGAAGGTCGAAATATTCGGACACTTGAG
ACTTTGACAGGTATCGATTTGATTATTGATGATACCCCACAAGCCGTTGTTTTGAGCGGCTTTGACCCAATTCGCCGGGA
AATCGCGCGAATTGCTTTGGAAAAACTCATTCAAGATGGTCGGATCCATCCAGCACGAATTGAGGAAATGGTTGATAAGG
CGCGCAAAGAAATGGACGACCGGATTCGTGAAATTGGTGAACAAGCCATTTTCGATGTCGGTATCCATAATATGCATCCC
GATCTGATTAAGATTTTGGGCAGATTGCACTTCCGTACGAGTTACGGTCAGAACGTTCTGGATCATTCGATTCAGGTCGC
CAAACTGACTGGTGTGATGGCTGCTGAATTAGGAGAAGATGTCACCTTAGCGAAACGCGCGGGGTTATTACATGATATAG
GCAAGGCGCTTGACCATGAAGTTGACGGATCTCACGTTGAAATCGGGGTTGAGCTGGCAACGAAGTACAAGGAACCAAAG
ACGGTCATCAACGCCATTGCATCGCATCATGGTGACGTTGAACCAACCAGTGTCATTTCGGTACTGGTTGCCGCAGCAGA
TGCGATTTCGGCTGCCCGCCCAGGCGCGCGGTCGGAATCGCTTGAGAACTATCTTCATCGTTTGGAGAAACTAGAAGCAA
TCGCCAACAGTCATGCTGGCGTGGATCATAGTTTCGCTATTCAAGCAGGTCGAGAAGTCCGGGTCATCGTCCAACCGGAA
AAGCTCTCTGATGATCAGAGCGTCATCTTGGCCCGTGATATTCGCAATGAAATTGAAAAAGAACTGGAGTATCCAGGCCA
TATCAAAGTCACCGTGATTCGGGAGACAAGGACTGTGGAATACGCCAAGTAA

Upstream 100 bases:

>100_bases
CCCTAGCACGTAAACTAATAGAGGTGTAATAATTTAAAAAAGCATCAAAGATTTTGATCAAAATTTGATTGAATCGCTTA
GATGATGCGGAGGTGAAATG

Downstream 100 bases:

>100_bases
AAAACACAGTACCCACCAGCACAAAGTTGGTGGGTACTGTATTTTTTATGCTGTTTTAGTTCGGACGTTATTGTTAGACA
GTTAGATGTCCTCTTAGAGC

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 522

Protein sequence:

>523_residues
MSSVTLVSITLAAVIALAVGLLIGFALQKKLHQNNLDRATQTAEGIIEAAKKEAATLKKEKLLEAKDENHRYRTQLEDEL
KDRRTEVQKSEHRLNQREDTLDRRDDTLDRKEQSLADREANLNKRQQQLDEREQDISSEISKQHTELERIAELTHEQARQ
QILDQTQSELTHERAVMIKESEDEAKEAADKKAKVLIADAIQRSASDIVAETTVTVVNLPNDDMKGRIIGREGRNIRTLE
TLTGIDLIIDDTPQAVVLSGFDPIRREIARIALEKLIQDGRIHPARIEEMVDKARKEMDDRIREIGEQAIFDVGIHNMHP
DLIKILGRLHFRTSYGQNVLDHSIQVAKLTGVMAAELGEDVTLAKRAGLLHDIGKALDHEVDGSHVEIGVELATKYKEPK
TVINAIASHHGDVEPTSVISVLVAAADAISAARPGARSESLENYLHRLEKLEAIANSHAGVDHSFAIQAGREVRVIVQPE
KLSDDQSVILARDIRNEIEKELEYPGHIKVTVIRETRTVEYAK

Sequences:

>Translated_523_residues
MSSVTLVSITLAAVIALAVGLLIGFALQKKLHQNNLDRATQTAEGIIEAAKKEAATLKKEKLLEAKDENHRYRTQLEDEL
KDRRTEVQKSEHRLNQREDTLDRRDDTLDRKEQSLADREANLNKRQQQLDEREQDISSEISKQHTELERIAELTHEQARQ
QILDQTQSELTHERAVMIKESEDEAKEAADKKAKVLIADAIQRSASDIVAETTVTVVNLPNDDMKGRIIGREGRNIRTLE
TLTGIDLIIDDTPQAVVLSGFDPIRREIARIALEKLIQDGRIHPARIEEMVDKARKEMDDRIREIGEQAIFDVGIHNMHP
DLIKILGRLHFRTSYGQNVLDHSIQVAKLTGVMAAELGEDVTLAKRAGLLHDIGKALDHEVDGSHVEIGVELATKYKEPK
TVINAIASHHGDVEPTSVISVLVAAADAISAARPGARSESLENYLHRLEKLEAIANSHAGVDHSFAIQAGREVRVIVQPE
KLSDDQSVILARDIRNEIEKELEYPGHIKVTVIRETRTVEYAK
>Mature_522_residues
SSVTLVSITLAAVIALAVGLLIGFALQKKLHQNNLDRATQTAEGIIEAAKKEAATLKKEKLLEAKDENHRYRTQLEDELK
DRRTEVQKSEHRLNQREDTLDRRDDTLDRKEQSLADREANLNKRQQQLDEREQDISSEISKQHTELERIAELTHEQARQQ
ILDQTQSELTHERAVMIKESEDEAKEAADKKAKVLIADAIQRSASDIVAETTVTVVNLPNDDMKGRIIGREGRNIRTLET
LTGIDLIIDDTPQAVVLSGFDPIRREIARIALEKLIQDGRIHPARIEEMVDKARKEMDDRIREIGEQAIFDVGIHNMHPD
LIKILGRLHFRTSYGQNVLDHSIQVAKLTGVMAAELGEDVTLAKRAGLLHDIGKALDHEVDGSHVEIGVELATKYKEPKT
VINAIASHHGDVEPTSVISVLVAAADAISAARPGARSESLENYLHRLEKLEAIANSHAGVDHSFAIQAGREVRVIVQPEK
LSDDQSVILARDIRNEIEKELEYPGHIKVTVIRETRTVEYAK

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CNPD_LACC3 (Q03AP9)

Other databases:

- EMBL:   CP000423
- RefSeq:   YP_806165.1
- ProteinModelPortal:   Q03AP9
- SMR:   Q03AP9
- STRING:   Q03AP9
- GeneID:   4419321
- GenomeReviews:   CP000423_GR
- KEGG:   lca:LSEI_0924
- eggNOG:   COG1418
- HOGENOM:   HBG734610
- OMA:   HPGRIEE
- ProtClustDB:   PRK12704
- BioCyc:   LCAS321967:LSEI_0924-MONOMER
- HAMAP:   MF_00335
- InterPro:   IPR017705
- InterPro:   IPR022711
- InterPro:   IPR004087
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR003607
- InterPro:   IPR006675
- SMART:   SM00471
- SMART:   SM00322
- TIGRFAMs:   TIGR00277
- TIGRFAMs:   TIGR03319

Pfam domain/function: PF12072 DUF3552; PF00013 KH_1

EC number: =3.1.4.16

Molecular weight: Translated: 58612; Mature: 58481

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13d003cc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVTLVSITLAAVIALAVGLLIGFALQKKLHQNNLDRATQTAEGIIEAAKKEAATLKKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KLLEAKDENHRYRTQLEDELKDRRTEVQKSEHRLNQREDTLDRRDDTLDRKEQSLADREA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
NLNKRQQQLDEREQDISSEISKQHTELERIAELTHEQARQQILDQTQSELTHERAVMIKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
SEDEAKEAADKKAKVLIADAIQRSASDIVAETTVTVVNLPNDDMKGRIIGREGRNIRTLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEECCCCCCEEHHH
TLTGIDLIIDDTPQAVVLSGFDPIRREIARIALEKLIQDGRIHPARIEEMVDKARKEMDD
HHCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RIREIGEQAIFDVGIHNMHPDLIKILGRLHFRTSYGQNVLDHSIQVAKLTGVMAAELGED
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
VTLAKRAGLLHDIGKALDHEVDGSHVEIGVELATKYKEPKTVINAIASHHGDVEPTSVIS
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHH
VLVAAADAISAARPGARSESLENYLHRLEKLEAIANSHAGVDHSFAIQAGREVRVIVQPE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCEEEEEECCC
KLSDDQSVILARDIRNEIEKELEYPGHIKVTVIRETRTVEYAK
CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCH
>Mature Secondary Structure 
SSVTLVSITLAAVIALAVGLLIGFALQKKLHQNNLDRATQTAEGIIEAAKKEAATLKKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KLLEAKDENHRYRTQLEDELKDRRTEVQKSEHRLNQREDTLDRRDDTLDRKEQSLADREA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
NLNKRQQQLDEREQDISSEISKQHTELERIAELTHEQARQQILDQTQSELTHERAVMIKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
SEDEAKEAADKKAKVLIADAIQRSASDIVAETTVTVVNLPNDDMKGRIIGREGRNIRTLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEECCCCCCEEHHH
TLTGIDLIIDDTPQAVVLSGFDPIRREIARIALEKLIQDGRIHPARIEEMVDKARKEMDD
HHCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RIREIGEQAIFDVGIHNMHPDLIKILGRLHFRTSYGQNVLDHSIQVAKLTGVMAAELGED
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
VTLAKRAGLLHDIGKALDHEVDGSHVEIGVELATKYKEPKTVINAIASHHGDVEPTSVIS
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHH
VLVAAADAISAARPGARSESLENYLHRLEKLEAIANSHAGVDHSFAIQAGREVRVIVQPE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCEEEEEECCC
KLSDDQSVILARDIRNEIEKELEYPGHIKVTVIRETRTVEYAK
CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA