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The map label for this gene is yugI [H]

Identifier: 116494372

GI number: 116494372

Start: 822913

End: 823296

Strand: Direct

Name: yugI [H]

Synonym: LSEI_0828

Alternate gene names: 116494372

Gene position: 822913-823296 (Clockwise)

Preceding gene: 116494371

Following gene: 116494373

Centisome position: 28.42

GC content: 46.88

Gene sequence:

>384_bases
ATGGAATATCGCATAGGAGATATCTTGACTGGCAAAGTGACAGGCGTTCAACCTTATGGCGCGTTTGTCATGCTTGATGA
GCACACGCAAGGTTTAGTGCACATCTCAGAATGCCAGCATGGTTATGTCAAGGACACCAGCGATATTTTTACCGTCGGCC
AGCGAGTTGAAGTTGTGATTTTGGACATCGACGAATATACCCAAAAAATCAGTTTATCCTTACGTGCCTTACAAGCGTCG
CCTAGAATGAGTAAAAAGCGTCGCCGCAAGCATTATTGGACCAGTCGTAAATTTCACACAGGCTTTGCACCGATTGCCGC
TCGGTTAGACGGGTGGGTCGCTGAAGCACTTGATCATTTAGACGAAGAACCGGCTCACAAATGA

Upstream 100 bases:

>100_bases
ACCGGTCACGATTGATCAGGTTACGATTGAAGACTAATATTGGTCGGCAATGATTTTTAGGGTATACTCAAAGAGAAATC
CAATGAAATGAAGTGTCAGA

Downstream 100 bases:

>100_bases
GCCGGTTCTTTTTTTCTGAACTTTTGTCACGATGAATAGAATAATGTTCGCAGAAATGCTGAATTTTTATGCAATTCCGG
AGAAAATGTTTGCGATCTTT

Product: RNA-binding protein

Products: NA

Alternate protein names: GSP13 [H]

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MEYRIGDILTGKVTGVQPYGAFVMLDEHTQGLVHISECQHGYVKDTSDIFTVGQRVEVVILDIDEYTQKISLSLRALQAS
PRMSKKRRRKHYWTSRKFHTGFAPIAARLDGWVAEALDHLDEEPAHK

Sequences:

>Translated_127_residues
MEYRIGDILTGKVTGVQPYGAFVMLDEHTQGLVHISECQHGYVKDTSDIFTVGQRVEVVILDIDEYTQKISLSLRALQAS
PRMSKKRRRKHYWTSRKFHTGFAPIAARLDGWVAEALDHLDEEPAHK
>Mature_127_residues
MEYRIGDILTGKVTGVQPYGAFVMLDEHTQGLVHISECQHGYVKDTSDIFTVGQRVEVVILDIDEYTQKISLSLRALQAS
PRMSKKRRRKHYWTSRKFHTGFAPIAARLDGWVAEALDHLDEEPAHK

Specific function: Unknown

COG id: COG1098

COG function: function code J; Predicted RNA binding protein (contains ribosomal protein S1 domain)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR000110
- InterPro:   IPR022967 [H]

Pfam domain/function: PF00575 S1 [H]

EC number: NA

Molecular weight: Translated: 14509; Mature: 14509

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYRIGDILTGKVTGVQPYGAFVMLDEHTQGLVHISECQHGYVKDTSDIFTVGQRVEVVI
CCEECCCEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHHCCCCEEEEEE
LDIDEYTQKISLSLRALQASPRMSKKRRRKHYWTSRKFHTGFAPIAARLDGWVAEALDHL
EEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
DEEPAHK
CCCCCCC
>Mature Secondary Structure
MEYRIGDILTGKVTGVQPYGAFVMLDEHTQGLVHISECQHGYVKDTSDIFTVGQRVEVVI
CCEECCCEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHHCCCCEEEEEE
LDIDEYTQKISLSLRALQASPRMSKKRRRKHYWTSRKFHTGFAPIAARLDGWVAEALDHL
EEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
DEEPAHK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377; 9298659 [H]