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The map label for this gene is yutD [H]

Identifier: 116494364

GI number: 116494364

Start: 817628

End: 818272

Strand: Direct

Name: yutD [H]

Synonym: LSEI_0820

Alternate gene names: 116494364

Gene position: 817628-818272 (Clockwise)

Preceding gene: 116494363

Following gene: 116494365

Centisome position: 28.24

GC content: 46.05

Gene sequence:

>645_bases
ATGGGCGAACATGAACCGCTTATACAACAAATTGATGCCGCATTGACCCCAGAAGCTGATAAAGATTCGCGGGTGGTCAT
TGTTAACGGTGATTTACTAACGATTGATGGTCGCCGCTATCGCCTTGTTAAGGATCACCGAAATGCTTTTGATGTTGCGC
GTTTGAACGAACGCTACAACGAAATTCTTGATAAGTATGATTATATCGTTGGTGATTGGGGCTATGATCAGCTGCGTTTA
CGCGGATTCTATAAAGATGATCGACGCGGTGTCAGCAAAGACCAGCTCATCGGCACACTTGAAGATTATTTGTATGAATA
TTGTAATTTTGGCTGTGCTTACTTTGTTTTGGCGTGTTTAGACAAGTCAGTGACAAAAGGGCAGCCGCATCGTCGTCAGG
GACATCGTGAGGCGGGGCAGAGATCAGAAACGATCAAACCAGTGCATCGCCAGACACCCCCAACAAATCGGCGCAACAGC
CAAAACAATAAGCATAAGCCACGGTCAGCAAAAGCGGAAAAACCGTATACGGAAAAAACAACCCGACCAACCAAAATTCG
CGGCGATCAGGCTAAAACTATCAATCAGACACAACCACGCAAGCGACATTTTACGATTCGGCGGCGTGAGACTAATAAGA
AGTAG

Upstream 100 bases:

>100_bases
CTATTACGGAATGTGGTGGGCGAGTACTTAGCTCAAAAATATCCATTATGATTTCGTGATATACTTTGCGAAGCATCAGC
ACACATAAGGAGGTGAGCAC

Downstream 100 bases:

>100_bases
GGACGAACTTGAAGTATAAAGGCTATATGATCGATCTTGATGGCACTATCTATCGCGGTAAGGAGCGGATTCCCGCTGCA
AAGGATTTCGTTGAACGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MGEHEPLIQQIDAALTPEADKDSRVVIVNGDLLTIDGRRYRLVKDHRNAFDVARLNERYNEILDKYDYIVGDWGYDQLRL
RGFYKDDRRGVSKDQLIGTLEDYLYEYCNFGCAYFVLACLDKSVTKGQPHRRQGHREAGQRSETIKPVHRQTPPTNRRNS
QNNKHKPRSAKAEKPYTEKTTRPTKIRGDQAKTINQTQPRKRHFTIRRRETNKK

Sequences:

>Translated_214_residues
MGEHEPLIQQIDAALTPEADKDSRVVIVNGDLLTIDGRRYRLVKDHRNAFDVARLNERYNEILDKYDYIVGDWGYDQLRL
RGFYKDDRRGVSKDQLIGTLEDYLYEYCNFGCAYFVLACLDKSVTKGQPHRRQGHREAGQRSETIKPVHRQTPPTNRRNS
QNNKHKPRSAKAEKPYTEKTTRPTKIRGDQAKTINQTQPRKRHFTIRRRETNKK
>Mature_213_residues
GEHEPLIQQIDAALTPEADKDSRVVIVNGDLLTIDGRRYRLVKDHRNAFDVARLNERYNEILDKYDYIVGDWGYDQLRLR
GFYKDDRRGVSKDQLIGTLEDYLYEYCNFGCAYFVLACLDKSVTKGQPHRRQGHREAGQRSETIKPVHRQTPPTNRRNSQ
NNKHKPRSAKAEKPYTEKTTRPTKIRGDQAKTINQTQPRKRHFTIRRRETNKK

Specific function: Unknown

COG id: COG4470

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009370 [H]

Pfam domain/function: PF06265 DUF1027 [H]

EC number: NA

Molecular weight: Translated: 25157; Mature: 25025

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEHEPLIQQIDAALTPEADKDSRVVIVNGDLLTIDGRRYRLVKDHRNAFDVARLNERYN
CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCEEEECCCEEEEHHHCCCHHHHHHHHHHHH
EILDKYDYIVGDWGYDQLRLRGFYKDDRRGVSKDQLIGTLEDYLYEYCNFGCAYFVLACL
HHHHHHHCEECCCCCCHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
DKSVTKGQPHRRQGHREAGQRSETIKPVHRQTPPTNRRNSQNNKHKPRSAKAEKPYTEKT
HHHHHCCCCHHHHHHHHHHCCCHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TRPTKIRGDQAKTINQTQPRKRHFTIRRRETNKK
CCCCEECCCCCCCCCCCCCHHHHEEEECCCCCCC
>Mature Secondary Structure 
GEHEPLIQQIDAALTPEADKDSRVVIVNGDLLTIDGRRYRLVKDHRNAFDVARLNERYN
CCCHHHHHHHHHHCCCCCCCCCEEEEEECCEEEECCCEEEEHHHCCCHHHHHHHHHHHH
EILDKYDYIVGDWGYDQLRLRGFYKDDRRGVSKDQLIGTLEDYLYEYCNFGCAYFVLACL
HHHHHHHCEECCCCCCHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
DKSVTKGQPHRRQGHREAGQRSETIKPVHRQTPPTNRRNSQNNKHKPRSAKAEKPYTEKT
HHHHHCCCCHHHHHHHHHHCCCHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TRPTKIRGDQAKTINQTQPRKRHFTIRRRETNKK
CCCCEECCCCCCCCCCCCCHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]