| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494062
Identifier: 116494062
GI number: 116494062
Start: 509758
End: 509976
Strand: Direct
Name: 116494062
Synonym: LSEI_0504
Alternate gene names: NA
Gene position: 509758-509976 (Clockwise)
Preceding gene: 116494060
Following gene: 116494064
Centisome position: 17.61
GC content: 41.55
Gene sequence:
>219_bases ATGGCCAGAGAAATTGGCAAGCAACTTGACCGTCTTGAATCACTTGCATACAAAGTAAGAACTGATCAGTACCTTTTGGA TTATTTGAGAGAATGGGCAGAAACCAAGTGCGATCTATTCAGGGATGATGATCCTCACATGACCGATGGTGAGAAGATTC AAGACCGGCTGTTCCTAAAAGACAACTTTAAAAAATACATGGATATCTTGGGTCCCTAG
Upstream 100 bases:
>100_bases GCAAAACAAAAACCGCTAAGCGCTAGCACACTTAACGGCCAAAAATGAGGTTTCACACTGATTGACCTCATTATATCACA GAAAGAAATGAGGTAAAACA
Downstream 100 bases:
>100_bases ATTGCAATAATAAAGTTACCACCTAGAAAGAGGCTTGCTCACTGCTTGAACTGGGGTTTGCCAACGGAGACATTTTCTAG GTTTGTTATTGATAAGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MAREIGKQLDRLESLAYKVRTDQYLLDYLREWAETKCDLFRDDDPHMTDGEKIQDRLFLKDNFKKYMDILGP
Sequences:
>Translated_72_residues MAREIGKQLDRLESLAYKVRTDQYLLDYLREWAETKCDLFRDDDPHMTDGEKIQDRLFLKDNFKKYMDILGP >Mature_71_residues AREIGKQLDRLESLAYKVRTDQYLLDYLREWAETKCDLFRDDDPHMTDGEKIQDRLFLKDNFKKYMDILGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8716; Mature: 8585
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAREIGKQLDRLESLAYKVRTDQYLLDYLREWAETKCDLFRDDDPHMTDGEKIQDRLFLK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH DNFKKYMDILGP HHHHHHHHHCCC >Mature Secondary Structure AREIGKQLDRLESLAYKVRTDQYLLDYLREWAETKCDLFRDDDPHMTDGEKIQDRLFLK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH DNFKKYMDILGP HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA