Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494046

Identifier: 116494046

GI number: 116494046

Start: 502891

End: 503511

Strand: Direct

Name: 116494046

Synonym: LSEI_0488

Alternate gene names: NA

Gene position: 502891-503511 (Clockwise)

Preceding gene: 116494042

Following gene: 116494052

Centisome position: 17.37

GC content: 41.22

Gene sequence:

>621_bases
ATGGAAATGCAACAACTAATCTTAGCGGGTATCCCTGGGTTCTTGACTTTCATATGGCTCGATAAGCTAGATGCTATTCA
TTTCGATTTGCCAGCAAGACAGGCAGATCGTACTATCGCTTTGATTCTGATATCTATGCTGAATGCTGCTGGTGGCCTCG
CAATTTACCAGCAAATCTGGGGAACAGTTGGTCACAGCTTCTGGAGTGAATTTGGCCTTTTCGTAGTTACGCTGATTTTG
TCTGTTCCATTAGCCTTCACTTACTATTTCTTAATTAAGCTAGGAAATTCATGCCTGATATGGATACAAGAACAATTTCA
CGTTGCCACCGTATTGCCAGGGTCGCCGCTAGTTGAGGCATTAAAAAATAAAGAATACAGTGAGGAAAAGCTTGTCATCA
TTTTCGACTTTAACGACAAGCTTATCTCTAGTGGTTACGCCAATCGCCTACCTGGAAGCGACGACCCAACTCAACAAATC
GGGTTGATGACATATGGACAGGATTGGACCGTGAAATTGGCACAGAAAAAATATGATGAGTCTCCACAAAACAGTGAACA
AATCATTGACTTCGACCGACAATTGAAAATTTATATTATCGGAATCAATCCTTATTCTTAG

Upstream 100 bases:

>100_bases
ATTGGTTTCATAGGCTTTACCCCCTACAATCTGTGTGGTTTTTTGTGATATAATTAAGTGAATGAAATTCATGCAAAAAG
AAATTAGGTGAGTATAAATC

Downstream 100 bases:

>100_bases
AAGATGCCGAATCCGGCATCTTTGGTTTGGGGGGAACAGGGTCTTTGTGAACTAATTTGATTGAACGATTTTGTACATTT
CTGTCGAAAAAGAGGCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MEMQQLILAGIPGFLTFIWLDKLDAIHFDLPARQADRTIALILISMLNAAGGLAIYQQIWGTVGHSFWSEFGLFVVTLIL
SVPLAFTYYFLIKLGNSCLIWIQEQFHVATVLPGSPLVEALKNKEYSEEKLVIIFDFNDKLISSGYANRLPGSDDPTQQI
GLMTYGQDWTVKLAQKKYDESPQNSEQIIDFDRQLKIYIIGINPYS

Sequences:

>Translated_206_residues
MEMQQLILAGIPGFLTFIWLDKLDAIHFDLPARQADRTIALILISMLNAAGGLAIYQQIWGTVGHSFWSEFGLFVVTLIL
SVPLAFTYYFLIKLGNSCLIWIQEQFHVATVLPGSPLVEALKNKEYSEEKLVIIFDFNDKLISSGYANRLPGSDDPTQQI
GLMTYGQDWTVKLAQKKYDESPQNSEQIIDFDRQLKIYIIGINPYS
>Mature_206_residues
MEMQQLILAGIPGFLTFIWLDKLDAIHFDLPARQADRTIALILISMLNAAGGLAIYQQIWGTVGHSFWSEFGLFVVTLIL
SVPLAFTYYFLIKLGNSCLIWIQEQFHVATVLPGSPLVEALKNKEYSEEKLVIIFDFNDKLISSGYANRLPGSDDPTQQI
GLMTYGQDWTVKLAQKKYDESPQNSEQIIDFDRQLKIYIIGINPYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23341; Mature: 23341

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMQQLILAGIPGFLTFIWLDKLDAIHFDLPARQADRTIALILISMLNAAGGLAIYQQIW
CCHHHHHHHCCHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GTVGHSFWSEFGLFVVTLILSVPLAFTYYFLIKLGNSCLIWIQEQFHVATVLPGSPLVEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCHHHHH
LKNKEYSEEKLVIIFDFNDKLISSGYANRLPGSDDPTQQIGLMTYGQDWTVKLAQKKYDE
HHCCCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCCHHHEEEEEECCCCEEEEHHHHCCC
SPQNSEQIIDFDRQLKIYIIGINPYS
CCCCCHHHCCCCCEEEEEEEEECCCC
>Mature Secondary Structure
MEMQQLILAGIPGFLTFIWLDKLDAIHFDLPARQADRTIALILISMLNAAGGLAIYQQIW
CCHHHHHHHCCHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GTVGHSFWSEFGLFVVTLILSVPLAFTYYFLIKLGNSCLIWIQEQFHVATVLPGSPLVEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCHHHHH
LKNKEYSEEKLVIIFDFNDKLISSGYANRLPGSDDPTQQIGLMTYGQDWTVKLAQKKYDE
HHCCCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCCHHHEEEEEECCCCEEEEHHHHCCC
SPQNSEQIIDFDRQLKIYIIGINPYS
CCCCCHHHCCCCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA