Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494024

Identifier: 116494024

GI number: 116494024

Start: 470147

End: 471295

Strand: Direct

Name: 116494024

Synonym: LSEI_0463

Alternate gene names: NA

Gene position: 470147-471295 (Clockwise)

Preceding gene: 116494023

Following gene: 116494025

Centisome position: 16.24

GC content: 45.95

Gene sequence:

>1149_bases
ATGAAATTATTTTGGATGGAGGTCAAACGGCAAACAACGAGCCTGACTTTTACGATTTACACCTTATTAGTGATGGCATT
TGTGTTGTTAAATATGTGGCCAATGCTCGCACGAAACGTGGCGGCGTTGCCGACATCAACTAATAGCTACGACGATATCA
CAGCAACCGACTTCCAGACGCGCAAAACAAACGGCGTTGGCCAGTTACGATACGACTATCAGCACAATACTTACGTCACG
TATCCCTTGGGGTTTGCAAAAACAGTGACACTACCAAAGGCAGATCAGGCCCGTGTTCGTAGTTTACTGACACAAGCCAA
CCAAGCAGAGACACAAGCCACATTGGTGAAAGCACTGGGACAGGTGGACAGGTTGATTGGCGGACAATCGGCTTATAGTT
CACAGAACATTCAGGGGTTTGCGTCGCGACCGATGACAAAAGCCGAGGCACGGCAAGATCACAATCTGATTCTCAAAAAA
GACCGTATCAGTGGTACCTTTGCACGACTATTTGCCGATTACGCCGGTATTGTCATGGGAATTCTACCCACCGTTGTCGT
CATCGCTTATTGTTATGCTGATCGTCGAAGTCGTGCAACGACAAGTCTGCAATCGAAAATGACCAGTACTTGGCGACTAG
TAGGCAGTCGATACTTAGCAAGTCTCGTGACACTTTTGATGCCGATTTTTTTGATGGGAATCGTCTTAACCATTCAAATC
GCTTTGCATTATCAAGGGTATCAAATTGATTATCTCGCGTTCTTCAAAATGACCGGACTGTGGTTATTGCCAACAGTGAT
GGTTAGCAGCGCAGTGGGCTTTTTAAGTGATGCGCTTTTTGGCAATTTTCTCGGATTCGTGGTGCAGATTGGTTGGTGGT
TGAGCACGATGATGATTGGTGCGCGGCAAGTTGCTGGCAATTATGGCTGGTTGCTGATACCGCGACATAATTCACTGCAT
AACGTTGCCTACTATGAGGCTCATCTACCAGAATTACTGTTTAATCGATTAACCTATGCCGCGCTCGCCATTGGTTTTAT
TTGCTTAGCTGTGGTGTTGTTAAATCTTCAACGAGGAGGAAAATTTCATGCCATCAACTTTGAAACGCTTGGTCGGGTTA
GAACTCAAAGCCAACGAGTGCAACACTAG

Upstream 100 bases:

>100_bases
GATTTTTAGCTGCCAGTCAGATCAATACCAGTGCGCAAGTTCTGCCAACATTGGAGGAGGCTTATCTATATTTGCAGATG
AAGCATGAGGAGGCCTTCTT

Downstream 100 bases:

>100_bases
TTTGATCGTGCTTGGGTGTGGCCTGCTCATGCCGGTTGTTTTTACGATGACGCCAAGCAACTTAGCACAGGCCGCCATGC
CGGGCGAGTTGTTTCTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKLFWMEVKRQTTSLTFTIYTLLVMAFVLLNMWPMLARNVAALPTSTNSYDDITATDFQTRKTNGVGQLRYDYQHNTYVT
YPLGFAKTVTLPKADQARVRSLLTQANQAETQATLVKALGQVDRLIGGQSAYSSQNIQGFASRPMTKAEARQDHNLILKK
DRISGTFARLFADYAGIVMGILPTVVVIAYCYADRRSRATTSLQSKMTSTWRLVGSRYLASLVTLLMPIFLMGIVLTIQI
ALHYQGYQIDYLAFFKMTGLWLLPTVMVSSAVGFLSDALFGNFLGFVVQIGWWLSTMMIGARQVAGNYGWLLIPRHNSLH
NVAYYEAHLPELLFNRLTYAALAIGFICLAVVLLNLQRGGKFHAINFETLGRVRTQSQRVQH

Sequences:

>Translated_382_residues
MKLFWMEVKRQTTSLTFTIYTLLVMAFVLLNMWPMLARNVAALPTSTNSYDDITATDFQTRKTNGVGQLRYDYQHNTYVT
YPLGFAKTVTLPKADQARVRSLLTQANQAETQATLVKALGQVDRLIGGQSAYSSQNIQGFASRPMTKAEARQDHNLILKK
DRISGTFARLFADYAGIVMGILPTVVVIAYCYADRRSRATTSLQSKMTSTWRLVGSRYLASLVTLLMPIFLMGIVLTIQI
ALHYQGYQIDYLAFFKMTGLWLLPTVMVSSAVGFLSDALFGNFLGFVVQIGWWLSTMMIGARQVAGNYGWLLIPRHNSLH
NVAYYEAHLPELLFNRLTYAALAIGFICLAVVLLNLQRGGKFHAINFETLGRVRTQSQRVQH
>Mature_382_residues
MKLFWMEVKRQTTSLTFTIYTLLVMAFVLLNMWPMLARNVAALPTSTNSYDDITATDFQTRKTNGVGQLRYDYQHNTYVT
YPLGFAKTVTLPKADQARVRSLLTQANQAETQATLVKALGQVDRLIGGQSAYSSQNIQGFASRPMTKAEARQDHNLILKK
DRISGTFARLFADYAGIVMGILPTVVVIAYCYADRRSRATTSLQSKMTSTWRLVGSRYLASLVTLLMPIFLMGIVLTIQI
ALHYQGYQIDYLAFFKMTGLWLLPTVMVSSAVGFLSDALFGNFLGFVVQIGWWLSTMMIGARQVAGNYGWLLIPRHNSLH
NVAYYEAHLPELLFNRLTYAALAIGFICLAVVLLNLQRGGKFHAINFETLGRVRTQSQRVQH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42959; Mature: 42959

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFWMEVKRQTTSLTFTIYTLLVMAFVLLNMWPMLARNVAALPTSTNSYDDITATDFQT
CCEEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCH
RKTNGVGQLRYDYQHNTYVTYPLGFAKTVTLPKADQARVRSLLTQANQAETQATLVKALG
HCCCCCEEEEEEECCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QVDRLIGGQSAYSSQNIQGFASRPMTKAEARQDHNLILKKDRISGTFARLFADYAGIVMG
HHHHHHCCCCCCCCCCCCHHHCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
ILPTVVVIAYCYADRRSRATTSLQSKMTSTWRLVGSRYLASLVTLLMPIFLMGIVLTIQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALHYQGYQIDYLAFFKMTGLWLLPTVMVSSAVGFLSDALFGNFLGFVVQIGWWLSTMMIG
HEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARQVAGNYGWLLIPRHNSLHNVAYYEAHLPELLFNRLTYAALAIGFICLAVVLLNLQRGG
HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KFHAINFETLGRVRTQSQRVQH
EEEEECHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLFWMEVKRQTTSLTFTIYTLLVMAFVLLNMWPMLARNVAALPTSTNSYDDITATDFQT
CCEEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCH
RKTNGVGQLRYDYQHNTYVTYPLGFAKTVTLPKADQARVRSLLTQANQAETQATLVKALG
HCCCCCEEEEEEECCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QVDRLIGGQSAYSSQNIQGFASRPMTKAEARQDHNLILKKDRISGTFARLFADYAGIVMG
HHHHHHCCCCCCCCCCCCHHHCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
ILPTVVVIAYCYADRRSRATTSLQSKMTSTWRLVGSRYLASLVTLLMPIFLMGIVLTIQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALHYQGYQIDYLAFFKMTGLWLLPTVMVSSAVGFLSDALFGNFLGFVVQIGWWLSTMMIG
HEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARQVAGNYGWLLIPRHNSLHNVAYYEAHLPELLFNRLTYAALAIGFICLAVVLLNLQRGG
HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KFHAINFETLGRVRTQSQRVQH
EEEEECHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA