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The map label for this gene is yvdE [H]

Identifier: 116494001

GI number: 116494001

Start: 441999

End: 442751

Strand: Direct

Name: yvdE [H]

Synonym: LSEI_0438

Alternate gene names: 116494001

Gene position: 441999-442751 (Clockwise)

Preceding gene: 116494000

Following gene: 116494002

Centisome position: 15.27

GC content: 46.88

Gene sequence:

>753_bases
GTGAAGCCAAAAATTGGGATTCCCACAGATGAATTGATCGAAGTTAACCCAGTGATGCCAAACAACCATCCTGCCTATGC
GCCGCATGATTTGAAAGAGGCTTTTATTAAACTTGATGCTTTGCCGCTGATCATTGCGTTTCCTGATGATGTCAGCCAAA
CTGAGCAGCTTGCGCAAGATTATGTGCAGCTGATTGATGGCCTCATGTTGCCTGGTGGTCCGGATGTTGATCCCACATTC
TATGGGGAAGAACCGCATCCCAAGATTGGCATGACGCTTTATCAGAAAGATCTTTTCGAAATTGCATTGATCAAAGCGGC
ACTGGCGGCAAATAAACCGATTTTTGGTATCTGCCGTGGCATTCAGATCATGAATGTGGCGATGGGCGGTACGTTGTATC
AGGATTTGGAAAGTCAATACCCTGATTTGAAAATTCAGCATCCCCAAGCCACACTGGGCCAATTTGCGACCCACCATGTT
GATTTGACACCTGATAGCCGATTGGCTGCCTTGTATGGGAAGACCACGATTAAAGTGAACTCGCGGCATCATCAGGCAGT
TAAAACTGTCGGCAAGGGCATGCGGGTGACAGCGGTGGCTCCTGATGGCGTTGTTGAGGGGATGGAGTCAATCGACAATG
ATCTTTTTCTCGGGGTGCAATGGCATCCAGAAAACATGTGGCAACAAGAAGATCCGCAACAATTAGTGGTCTTTCAAGAC
TTTTTGGATCGGATTGCTACACATCAAAAATAA

Upstream 100 bases:

>100_bases
CGGATGAATTGCGACGGCCGATGATGCTCATTGTGGCGACTACCAAAACGGCGTATACTCATGAAAAATAAATCCTAAGT
AGAATAGAAGGAAATAAATC

Downstream 100 bases:

>100_bases
GGATGTTACGATTAGCTCGAATAACAGAACAAGCACCTGATCAGCTCAAAAATTCTTTGAGATTGGTCGGGTGCTTGTTT
TATTTCGATGAAGGCCTTGG

Product: glutamine amidotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKPKIGIPTDELIEVNPVMPNNHPAYAPHDLKEAFIKLDALPLIIAFPDDVSQTEQLAQDYVQLIDGLMLPGGPDVDPTF
YGEEPHPKIGMTLYQKDLFEIALIKAALAANKPIFGICRGIQIMNVAMGGTLYQDLESQYPDLKIQHPQATLGQFATHHV
DLTPDSRLAALYGKTTIKVNSRHHQAVKTVGKGMRVTAVAPDGVVEGMESIDNDLFLGVQWHPENMWQQEDPQQLVVFQD
FLDRIATHQK

Sequences:

>Translated_250_residues
MKPKIGIPTDELIEVNPVMPNNHPAYAPHDLKEAFIKLDALPLIIAFPDDVSQTEQLAQDYVQLIDGLMLPGGPDVDPTF
YGEEPHPKIGMTLYQKDLFEIALIKAALAANKPIFGICRGIQIMNVAMGGTLYQDLESQYPDLKIQHPQATLGQFATHHV
DLTPDSRLAALYGKTTIKVNSRHHQAVKTVGKGMRVTAVAPDGVVEGMESIDNDLFLGVQWHPENMWQQEDPQQLVVFQD
FLDRIATHQK
>Mature_250_residues
MKPKIGIPTDELIEVNPVMPNNHPAYAPHDLKEAFIKLDALPLIIAFPDDVSQTEQLAQDYVQLIDGLMLPGGPDVDPTF
YGEEPHPKIGMTLYQKDLFEIALIKAALAANKPIFGICRGIQIMNVAMGGTLYQDLESQYPDLKIQHPQATLGQFATHHV
DLTPDSRLAALYGKTTIKVNSRHHQAVKTVGKGMRVTAVAPDGVVEGMESIDNDLFLGVQWHPENMWQQEDPQQLVVFQD
FLDRIATHQK

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=240, Percent_Identity=36.25, Blast_Score=111, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 27808; Mature: 27808

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKIGIPTDELIEVNPVMPNNHPAYAPHDLKEAFIKLDALPLIIAFPDDVSQTEQLAQD
CCCCCCCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
YVQLIDGLMLPGGPDVDPTFYGEEPHPKIGMTLYQKDLFEIALIKAALAANKPIFGICRG
HHHHHHCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IQIMNVAMGGTLYQDLESQYPDLKIQHPQATLGQFATHHVDLTPDSRLAALYGKTTIKVN
HHHEHHHHCCHHHHHHHHHCCCCEEECCHHHHHHHHHHEEECCCCCCEEEEECCEEEEEC
SRHHQAVKTVGKGMRVTAVAPDGVVEGMESIDNDLFLGVQWHPENMWQQEDPQQLVVFQD
CHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHH
FLDRIATHQK
HHHHHHCCCC
>Mature Secondary Structure
MKPKIGIPTDELIEVNPVMPNNHPAYAPHDLKEAFIKLDALPLIIAFPDDVSQTEQLAQD
CCCCCCCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
YVQLIDGLMLPGGPDVDPTFYGEEPHPKIGMTLYQKDLFEIALIKAALAANKPIFGICRG
HHHHHHCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IQIMNVAMGGTLYQDLESQYPDLKIQHPQATLGQFATHHVDLTPDSRLAALYGKTTIKVN
HHHEHHHHCCHHHHHHHHHCCCCEEECCHHHHHHHHHHEEECCCCCCEEEEECCEEEEEC
SRHHQAVKTVGKGMRVTAVAPDGVVEGMESIDNDLFLGVQWHPENMWQQEDPQQLVVFQD
CHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHH
FLDRIATHQK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]