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The map label for this gene is yceK [H]

Identifier: 116493992

GI number: 116493992

Start: 432596

End: 432889

Strand: Direct

Name: yceK [H]

Synonym: LSEI_0428

Alternate gene names: 116493992

Gene position: 432596-432889 (Clockwise)

Preceding gene: 116493990

Following gene: 116493993

Centisome position: 14.94

GC content: 43.54

Gene sequence:

>294_bases
ATGAATATCAAACAATCAACAGACGAAACTGCCTTCAAACAACGAATTTTCTTTGCTTTGTCTGAACCTGGTCGCTATAC
GATTGTCCGCATGCTTTACCACGTCGGTCATGAGATGGGCTGCAACGAGCTGAACCAGCACGTGGAGATTGACAAATCAA
CGATGTCATATCATTTGCGAACGCTTCGGGAAATTGGCATGATTACCACGCGTACCCAAGGACGACAAAAATTTGTTACG
CTGAATACAGGGAAAATTGAATCGGTTTTCCCGGGTTTACTTGAGAAGCTATAA

Upstream 100 bases:

>100_bases
AACTTATTTACCCAAAACATGAACCGTCTATGGAGAATTGAAAAGCTTATTTTTTCAAAAAAAGTTTGCTTACAGATTAA
GTTTGTGGCATAACTGTTGT

Downstream 100 bases:

>100_bases
ATAAGCACATGGTTGCTTATTTTTTAGCACTGATTGTTTGATAACTTTAAAACCGTAAAACTGATTGGAGACTTTCTGAT
GAAAGAACGTAGACTTTCGT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MNIKQSTDETAFKQRIFFALSEPGRYTIVRMLYHVGHEMGCNELNQHVEIDKSTMSYHLRTLREIGMITTRTQGRQKFVT
LNTGKIESVFPGLLEKL

Sequences:

>Translated_97_residues
MNIKQSTDETAFKQRIFFALSEPGRYTIVRMLYHVGHEMGCNELNQHVEIDKSTMSYHLRTLREIGMITTRTQGRQKFVT
LNTGKIESVFPGLLEKL
>Mature_97_residues
MNIKQSTDETAFKQRIFFALSEPGRYTIVRMLYHVGHEMGCNELNQHVEIDKSTMSYHLRTLREIGMITTRTQGRQKFVT
LNTGKIESVFPGLLEKL

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11262; Mature: 11262

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKQSTDETAFKQRIFFALSEPGRYTIVRMLYHVGHEMGCNELNQHVEIDKSTMSYHLR
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHH
TLREIGMITTRTQGRQKFVTLNTGKIESVFPGLLEKL
HHHHHCCHHCCCCCCEEEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNIKQSTDETAFKQRIFFALSEPGRYTIVRMLYHVGHEMGCNELNQHVEIDKSTMSYHLR
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHH
TLREIGMITTRTQGRQKFVTLNTGKIESVFPGLLEKL
HHHHHCCHHCCCCCCEEEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274031; 9384377 [H]