| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116493976
Identifier: 116493976
GI number: 116493976
Start: 418835
End: 419821
Strand: Direct
Name: 116493976
Synonym: LSEI_0412
Alternate gene names: NA
Gene position: 418835-419821 (Clockwise)
Preceding gene: 116493975
Following gene: 116493978
Centisome position: 14.47
GC content: 48.33
Gene sequence:
>987_bases ATGTGTTCTTCAATGACAATTAAATCGCTACAAGGTGATATTTTCTGGGGCCGGACCATGGATTACAACACCAGTTTCTT TCATGAATCACCAGTCGGCGGGGTTCCTGGTAAAATTGTCAGTTTGCCAGCAAACAAGGCATTACCAACACAAAGTGCCA AATGGACCACAAAGTATGCAGCGGTTGGCGTCGGTATTGATCAAAGTACGGCACTTTTCGACGGCGTCAATAGCGAAGGC TTGGCTGGCGACTTGCAGGTTTTGGTAGAGTGCAGCTGGGCGAGTGCAGATTCTTTGAAACAGCGTGGGCTGAAAGCTAT TAAAGGCGAGGAGTTTGTGACCTTGGCCTTGACGACATGCAAAAATGTTGACGAAGTACGCGCTTTGGCGGGTGAGTATG GCCTGCTGGATGAACCTTATGAGTTTGGCGGCCAAGGGGTGAAAATCCCATTACATTACACATTTGTTGATCCATCAGGT AAAGGGATTGTTGTCGAACCAACCGATCACGGCGCCTTTAAGCTGTATGATAGTATCGGCGCCATGACGAATAGTCCTGA ATACGGGTGGCATGAAACCAATTTGCGCAATTATGTCAGTCTGAATGACAATAACTATCCTAAGGGGTCCGAATTAGGCG ACTACCATATTGAGCCGATTGAGTTAGGCACAGGCTACGGGATGTTCGGTTTGCCAGGCGATTACACATCACCATCGCGG TTCCTGCGGGCAATGTTTGTTTCGCGTAATCTTGATCCCTTCAACAGCAAAGACGGCATTCGCGTGTTATACAATGCTTT CAAGACTGTCTTGATTCCGCAGGGGCTAGGTCGCGACCCACAACATCAGGTTTTAACGGATTACACGCAATACTGGTCTG GCTATGACCTGACGAAAAAGACGATTTGGGCGTGCGGACGTTTTTCTGGACTTTCACCATCAAGCTACCTTGCTCTGACG GTATTCCTGCGGGCTCTTTCCTCCTAA
Upstream 100 bases:
>100_bases TGAAGGGGATCGAGCCATTAAGCATTTCGGGTTATAATGACAGTAATCGTAAAAATTAAGCTTTAAACACTGACATTTAT TTTCGAAAGGGGTCGTTGCT
Downstream 100 bases:
>100_bases AACTTTTTTTCTTCGTTTGGTGTTATACCACTCAATATACTCATTGAGTGCTTGTGTGAAATCATCAATTGACTTTCCAA GCCAGCTTCGATTGTAAAAG
Product: conjugated bile salt hydrolase-like protein
Products: NA
Alternate protein names: Penicillin V amidase; PVA [H]
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MCSSMTIKSLQGDIFWGRTMDYNTSFFHESPVGGVPGKIVSLPANKALPTQSAKWTTKYAAVGVGIDQSTALFDGVNSEG LAGDLQVLVECSWASADSLKQRGLKAIKGEEFVTLALTTCKNVDEVRALAGEYGLLDEPYEFGGQGVKIPLHYTFVDPSG KGIVVEPTDHGAFKLYDSIGAMTNSPEYGWHETNLRNYVSLNDNNYPKGSELGDYHIEPIELGTGYGMFGLPGDYTSPSR FLRAMFVSRNLDPFNSKDGIRVLYNAFKTVLIPQGLGRDPQHQVLTDYTQYWSGYDLTKKTIWACGRFSGLSPSSYLALT VFLRALSS
Sequences:
>Translated_328_residues MCSSMTIKSLQGDIFWGRTMDYNTSFFHESPVGGVPGKIVSLPANKALPTQSAKWTTKYAAVGVGIDQSTALFDGVNSEG LAGDLQVLVECSWASADSLKQRGLKAIKGEEFVTLALTTCKNVDEVRALAGEYGLLDEPYEFGGQGVKIPLHYTFVDPSG KGIVVEPTDHGAFKLYDSIGAMTNSPEYGWHETNLRNYVSLNDNNYPKGSELGDYHIEPIELGTGYGMFGLPGDYTSPSR FLRAMFVSRNLDPFNSKDGIRVLYNAFKTVLIPQGLGRDPQHQVLTDYTQYWSGYDLTKKTIWACGRFSGLSPSSYLALT VFLRALSS >Mature_328_residues MCSSMTIKSLQGDIFWGRTMDYNTSFFHESPVGGVPGKIVSLPANKALPTQSAKWTTKYAAVGVGIDQSTALFDGVNSEG LAGDLQVLVECSWASADSLKQRGLKAIKGEEFVTLALTTCKNVDEVRALAGEYGLLDEPYEFGGQGVKIPLHYTFVDPSG KGIVVEPTDHGAFKLYDSIGAMTNSPEYGWHETNLRNYVSLNDNNYPKGSELGDYHIEPIELGTGYGMFGLPGDYTSPSR FLRAMFVSRNLDPFNSKDGIRVLYNAFKTVLIPQGLGRDPQHQVLTDYTQYWSGYDLTKKTIWACGRFSGLSPSSYLALT VFLRALSS
Specific function: The enzyme catalyzes the conversion of penicillin to 6- aminopenicillanate The precursor, furthermore, acts as a self- processing peptidase that cleaves off the propeptide. All peptidase activity is lost on conversion to the mature peptidase [H]
COG id: COG3049
COG function: function code M; Penicillin V acylase and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C59 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003199 [H]
Pfam domain/function: PF02275 CBAH [H]
EC number: =3.5.1.11 [H]
Molecular weight: Translated: 35944; Mature: 35944
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSSMTIKSLQGDIFWGRTMDYNTSFFHESPVGGVPGKIVSLPANKALPTQSAKWTTKYA CCCCCCHHHCCCCEEECCEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEE AVGVGIDQSTALFDGVNSEGLAGDLQVLVECSWASADSLKQRGLKAIKGEEFVTLALTTC EEECCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHCHHHCCCCCEEEEEEEHH KNVDEVRALAGEYGLLDEPYEFGGQGVKIPLHYTFVDPSGKGIVVEPTDHGAFKLYDSIG CCHHHHHHHHHCCCCCCCCHHHCCCEEEEEEEEEEECCCCCEEEEECCCCCCEEEHHHHC AMTNSPEYGWHETNLRNYVSLNDNNYPKGSELGDYHIEPIELGTGYGMFGLPGDYTSPSR CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEECCEEEECCCCCCCCCCCCCCCHHH FLRAMFVSRNLDPFNSKDGIRVLYNAFKTVLIPQGLGRDPQHQVLTDYTQYWSGYDLTKK HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCHH TIWACGRFSGLSPSSYLALTVFLRALSS HHHHHHCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MCSSMTIKSLQGDIFWGRTMDYNTSFFHESPVGGVPGKIVSLPANKALPTQSAKWTTKYA CCCCCCHHHCCCCEEECCEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEE AVGVGIDQSTALFDGVNSEGLAGDLQVLVECSWASADSLKQRGLKAIKGEEFVTLALTTC EEECCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHCHHHCCCCCEEEEEEEHH KNVDEVRALAGEYGLLDEPYEFGGQGVKIPLHYTFVDPSGKGIVVEPTDHGAFKLYDSIG CCHHHHHHHHHCCCCCCCCHHHCCCEEEEEEEEEEECCCCCEEEEECCCCCCEEEHHHHC AMTNSPEYGWHETNLRNYVSLNDNNYPKGSELGDYHIEPIELGTGYGMFGLPGDYTSPSR CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEECCEEEECCCCCCCCCCCCCCCHHH FLRAMFVSRNLDPFNSKDGIRVLYNAFKTVLIPQGLGRDPQHQVLTDYTQYWSGYDLTKK HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCHH TIWACGRFSGLSPSSYLALTVFLRALSS HHHHHHCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3026906 [H]