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The map label for this gene is ygjI [H]

Identifier: 116493951

GI number: 116493951

Start: 387369

End: 388850

Strand: Direct

Name: ygjI [H]

Synonym: LSEI_0385

Alternate gene names: 116493951

Gene position: 387369-388850 (Clockwise)

Preceding gene: 116493950

Following gene: 116493952

Centisome position: 13.38

GC content: 45.34

Gene sequence:

>1482_bases
ATGTCAGAGGATAAATCACGGCAACGGTTGGGATCGGCGGCATTAATGTTAATGACTTTCTCGGCGGTGTTTGCTTTTCC
GAGTATTGTCAATAACAGTATCCAGATCGACCTAGCAACAATACCGGGTTACATTTTCGGAAGTCTTTTCTATTTTTTGC
CTTTCATTCTGATGATTGCCGAATTTGCATCGGCTAACTCTGATAAGGAATCAGGGGTTCACAGTTGGTTAGAAAGTGTC
TCGGGCAGCAAGTTTGCTTTTCTTGGGGCATGGTCGTACTTCTTCGTTAATTTGTTCTTCTTTGTTTCCTTGTTACCTAA
CACGCTGATTTACGGATCCTATGCGTTATTAGGTCATAACGTGTTTGGCGGCGCGATGGGAACGAAAATCATCTCCATCC
TCTCAATCGTTTTGTTCTGGCTGGCGACTTGGCTTTGTATCAAAGGGGTTTCGTGGATCTCAACGGTCACCAACTTTGCT
GGTACGGCGCGGTTGTTTATGGGTTTGATCTTCGTCGTCCTCGCCTTCGTTGTGGTGATGGGAATGGGTGAAAAGCCTGC
TCAAGACTTTAGCATGCAGTCAATTACCCCGAACTTTAACTGGACCTTCTTCATGACCATGGCTTGGATTTTGCAAGCTG
TAGGGGGTGGCGAAAGTATCGGTGTCTACATTAAAGACACGAAAGGCGGCAACAAAACTTTTGTTCGAACCATGATTATT
TCAACGATTGTGGTTGGTCTGATGTATGTCCTTAGTGCCATTGCAGTTGGTTTTGTTGTGCCGAAGTCAGTCTTGGCTGG
CAATTTCTCCAATGGGATCTTTGATATTTTTAAGATTTTGGGAACACACTTCAATATTCCCGGAAATGTGATGGTTCGAC
TTGTCGGTTTGATTCTCTTTATTGGTAGTCTAGGTTCGTTGGCACTTTGGACAGCAGCGCCGGTTAAAGTCTTCTTCTCC
GAAATTCCTGAAGGGGTCTTTGGCAAATGGTTGGTTAAAACCAATGATGAAGGCAATCCAACCAACGCACTGATCGTTCA
AGGTGTGGTTGTGACGCTGTTGATGATTGTACCTGCACTTGGTATTGGTAATTTGGACAGTTTCCTAGAAACCTTGATTA
ACATGACAGCGGCAACTTCCTTATTGCCAGTCTTGTTCCTGCTGATTGCGTACATCATGTTACGGTGGAAGAAAGATGAC
ATGCCACGTGATTTCCGGTTTGGAAATCGGACGGTTGGTCTGACTGCCGGTATTTTCCTGCTCTGCGTCTTTTTGTTCGT
CTTCTTCATGTCGACCGTGCCAGATCCGCATTTGATCGCCGAAGAATTGGCTGGACATCTGCCAAAAGGCACCGCTAGTC
CAATCGGCACCTTACTTTACAACGTCCTTGGTGTCGTGATTTTCATGGGCGTGGCGTGGATTTATTGGAATCGCTATGAA
AAACGTGAACGGTTGGCAAAGGCAAATCCAGTTGCACATTAA

Upstream 100 bases:

>100_bases
ATCAACTCAAGCGCCATCGTTGCAAGTTTGATGACTTTGAACTTGGGTTTAACTTCAAAGTCAATTAATGGAGGAGCATT
AAGAAAGGAAGTGTTTCACG

Downstream 100 bases:

>100_bases
TCAGTCAGTTTTAGTTTAAGGTATGGTGACGTGGGTTTCGGCAATTGCTGAGGCCCACGTTAGCATATCAAAATGGTTCT
CGATGGCAGAGCGTACAAAA

Product: amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MSEDKSRQRLGSAALMLMTFSAVFAFPSIVNNSIQIDLATIPGYIFGSLFYFLPFILMIAEFASANSDKESGVHSWLESV
SGSKFAFLGAWSYFFVNLFFFVSLLPNTLIYGSYALLGHNVFGGAMGTKIISILSIVLFWLATWLCIKGVSWISTVTNFA
GTARLFMGLIFVVLAFVVVMGMGEKPAQDFSMQSITPNFNWTFFMTMAWILQAVGGGESIGVYIKDTKGGNKTFVRTMII
STIVVGLMYVLSAIAVGFVVPKSVLAGNFSNGIFDIFKILGTHFNIPGNVMVRLVGLILFIGSLGSLALWTAAPVKVFFS
EIPEGVFGKWLVKTNDEGNPTNALIVQGVVVTLLMIVPALGIGNLDSFLETLINMTAATSLLPVLFLLIAYIMLRWKKDD
MPRDFRFGNRTVGLTAGIFLLCVFLFVFFMSTVPDPHLIAEELAGHLPKGTASPIGTLLYNVLGVVIFMGVAWIYWNRYE
KRERLAKANPVAH

Sequences:

>Translated_493_residues
MSEDKSRQRLGSAALMLMTFSAVFAFPSIVNNSIQIDLATIPGYIFGSLFYFLPFILMIAEFASANSDKESGVHSWLESV
SGSKFAFLGAWSYFFVNLFFFVSLLPNTLIYGSYALLGHNVFGGAMGTKIISILSIVLFWLATWLCIKGVSWISTVTNFA
GTARLFMGLIFVVLAFVVVMGMGEKPAQDFSMQSITPNFNWTFFMTMAWILQAVGGGESIGVYIKDTKGGNKTFVRTMII
STIVVGLMYVLSAIAVGFVVPKSVLAGNFSNGIFDIFKILGTHFNIPGNVMVRLVGLILFIGSLGSLALWTAAPVKVFFS
EIPEGVFGKWLVKTNDEGNPTNALIVQGVVVTLLMIVPALGIGNLDSFLETLINMTAATSLLPVLFLLIAYIMLRWKKDD
MPRDFRFGNRTVGLTAGIFLLCVFLFVFFMSTVPDPHLIAEELAGHLPKGTASPIGTLLYNVLGVVIFMGVAWIYWNRYE
KRERLAKANPVAH
>Mature_492_residues
SEDKSRQRLGSAALMLMTFSAVFAFPSIVNNSIQIDLATIPGYIFGSLFYFLPFILMIAEFASANSDKESGVHSWLESVS
GSKFAFLGAWSYFFVNLFFFVSLLPNTLIYGSYALLGHNVFGGAMGTKIISILSIVLFWLATWLCIKGVSWISTVTNFAG
TARLFMGLIFVVLAFVVVMGMGEKPAQDFSMQSITPNFNWTFFMTMAWILQAVGGGESIGVYIKDTKGGNKTFVRTMIIS
TIVVGLMYVLSAIAVGFVVPKSVLAGNFSNGIFDIFKILGTHFNIPGNVMVRLVGLILFIGSLGSLALWTAAPVKVFFSE
IPEGVFGKWLVKTNDEGNPTNALIVQGVVVTLLMIVPALGIGNLDSFLETLINMTAATSLLPVLFLLIAYIMLRWKKDDM
PRDFRFGNRTVGLTAGIFLLCVFLFVFFMSTVPDPHLIAEELAGHLPKGTASPIGTLLYNVLGVVIFMGVAWIYWNRYEK
RERLAKANPVAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI48994921, Length=495, Percent_Identity=39.5959595959596, Blast_Score=359, Evalue=1e-100,
Organism=Escherichia coli, GI87081798, Length=458, Percent_Identity=24.4541484716157, Blast_Score=164, Evalue=2e-41,
Organism=Escherichia coli, GI87082380, Length=422, Percent_Identity=25.5924170616114, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1787768, Length=403, Percent_Identity=23.5732009925558, Blast_Score=82, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 54070; Mature: 53939

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDKSRQRLGSAALMLMTFSAVFAFPSIVNNSIQIDLATIPGYIFGSLFYFLPFILMIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCHHHHHHHHHHHHHHHHHH
EFASANSDKESGVHSWLESVSGSKFAFLGAWSYFFVNLFFFVSLLPNTLIYGSYALLGHN
HHHCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VFGGAMGTKIISILSIVLFWLATWLCIKGVSWISTVTNFAGTARLFMGLIFVVLAFVVVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMGEKPAQDFSMQSITPNFNWTFFMTMAWILQAVGGGESIGVYIKDTKGGNKTFVRTMII
CCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHH
STIVVGLMYVLSAIAVGFVVPKSVLAGNFSNGIFDIFKILGTHFNIPGNVMVRLVGLILF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
IGSLGSLALWTAAPVKVFFSEIPEGVFGKWLVKTNDEGNPTNALIVQGVVVTLLMIVPAL
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
GIGNLDSFLETLINMTAATSLLPVLFLLIAYIMLRWKKDDMPRDFRFGNRTVGLTAGIFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
LCVFLFVFFMSTVPDPHLIAEELAGHLPKGTASPIGTLLYNVLGVVIFMGVAWIYWNRYE
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRERLAKANPVAH
HHHHHHHCCCCCC
>Mature Secondary Structure 
SEDKSRQRLGSAALMLMTFSAVFAFPSIVNNSIQIDLATIPGYIFGSLFYFLPFILMIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCHHHHHHHHHHHHHHHHHH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HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]