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The map label for this gene is yhfU [H]

Identifier: 116493944

GI number: 116493944

Start: 377888

End: 378250

Strand: Direct

Name: yhfU [H]

Synonym: LSEI_0378

Alternate gene names: 116493944

Gene position: 377888-378250 (Clockwise)

Preceding gene: 116493943

Following gene: 116493945

Centisome position: 13.05

GC content: 46.28

Gene sequence:

>363_bases
ATGACAAGAATCGTCATTGGTGGTCAGATGGGTAAGGACGAGTTGAGGCAGTCACTTGAGAAACTGACCGCGGGTAAAGA
TGTCGAGATCAGTGTTAAGAGCGATCTTGATGCAGCCATGGCAGTCAAAGATAACAAGGCAGACTTTTATATTGGTGCTT
GCGAGACCGGTGCTGGCGGAGCCTTAGCAATGGCGACCGCGTTGTTAGGCTCTAGTAAGACACTGACAGTTGCATCACCC
TCGAAAGTTTTGTCTGAAGCGGACATCAAAGAGGGCATCGACAATGGGAAGATTGCATTTGGCTTTACAATTAACACGAA
GGACACGATTCTACCAATTCTTGCAAAATATCTGACTAAGTAA

Upstream 100 bases:

>100_bases
ATCTGGCAACATGTCGCGGCATCTCGGCCAGTTGAATTTTCGGATTTTGAAACACGCTATATTATCATGCATTTGGTTAA
TATTTTGAGGAGGGGTTAAT

Downstream 100 bases:

>100_bases
ACTTTTATGTCATAAGCCAATATACGGTATTTTGTATATTGAGAAAAGGAAGGTGTCAAAATGAATATTTCGGTCTTAGT
AGACTACGTGTTAATCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTRIVIGGQMGKDELRQSLEKLTAGKDVEISVKSDLDAAMAVKDNKADFYIGACETGAGGALAMATALLGSSKTLTVASP
SKVLSEADIKEGIDNGKIAFGFTINTKDTILPILAKYLTK

Sequences:

>Translated_120_residues
MTRIVIGGQMGKDELRQSLEKLTAGKDVEISVKSDLDAAMAVKDNKADFYIGACETGAGGALAMATALLGSSKTLTVASP
SKVLSEADIKEGIDNGKIAFGFTINTKDTILPILAKYLTK
>Mature_119_residues
TRIVIGGQMGKDELRQSLEKLTAGKDVEISVKSDLDAAMAVKDNKADFYIGACETGAGGALAMATALLGSSKTLTVASPS
KVLSEADIKEGIDNGKIAFGFTINTKDTILPILAKYLTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082253, Length=118, Percent_Identity=35.5932203389831, Blast_Score=85, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021238
- InterPro:   IPR003500 [H]

Pfam domain/function: PF10941 DUF2620 [H]

EC number: NA

Molecular weight: Translated: 12539; Mature: 12407

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIVIGGQMGKDELRQSLEKLTAGKDVEISVKSDLDAAMAVKDNKADFYIGACETGAGG
CCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCCCC
ALAMATALLGSSKTLTVASPSKVLSEADIKEGIDNGKIAFGFTINTKDTILPILAKYLTK
HHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TRIVIGGQMGKDELRQSLEKLTAGKDVEISVKSDLDAAMAVKDNKADFYIGACETGAGG
CEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCCCC
ALAMATALLGSSKTLTVASPSKVLSEADIKEGIDNGKIAFGFTINTKDTILPILAKYLTK
HHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]