| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is ulaA [H]
Identifier: 116493894
GI number: 116493894
Start: 327084
End: 328370
Strand: Direct
Name: ulaA [H]
Synonym: LSEI_0326
Alternate gene names: 116493894
Gene position: 327084-328370 (Clockwise)
Preceding gene: 116493893
Following gene: 116493895
Centisome position: 11.3
GC content: 49.11
Gene sequence:
>1287_bases ATGGTTGTGGTTAACTTTATTATTCAAAATATTCTGACTCAGGCAGCCATCACCATTGCGTTAATCGCGATGCTTGGCTT ACTTCTACAACGCAAGTCCTTTGGCGCGGTCCTAACTGGAACCTTCAAGACACTGCTGGGATTTCAAGTATTATCAGCAG GGTCCGCCATTATTGTCACAGCACTGACGTATTTCGGAAAGATTTTTCAACATGGTTTTCACCTAAAAGGGGTTGTACCC AGCATTGAGGCGATCAATGGTCAAGCCATGAATACGCTGGGGTTGGGAAATGAAATTGCCTTAACCTTTTTGGGCATCTT CATTGTCAACATTATCATTGCGCGGTTCTCGCCATGGAAATATATTTTTCTAACCGGACAGGCGCTGTTGTGGATGTCGA CCATGACGGTTGTCGGCGGCAAGATAGCTGGCTTTAATTCAGTTGTGACCATTGCTGTCGGTAGTGTCATCGGTGGGATT TTCGCGGTGGCCATGCCAGCCATTGCTCAGCCTTTTGTTCGTAAGATTACCAAGGGCGATGCCATTGCTTTAGGACACTT TTGTACGATCGGCTACATGGTAGAAGCAGGCGCCGCTTGGATCTTCGGTGAACGTGGCGAAAAGAAACACTCGATTGAAG ACATCAAGTTACCAAAGTACATGGAATTCTTGCAAGACACGTATCTCTCTGTTGCTGTTGTGATGGTGCCATTATTTATG ATCACCGCGGCTTTTGCAGGCCCTAAGTACGCCGGTAACGGCACGAGTCTGAACTATATCATGAATGCCTTCATGATGGG CATTCAGTTCGTTGTCGGGGTCTATGTCCTGCTTGCGGGCGTTCGGCTCTTACTTGGTGAAATCGTTCCGGCTTTCCGTG GTATTGCGATGAAACTGGTACCAAATGCGAAACCAGCACTTGACTGTCCAGTCTTGTTCCCATTCTCACCAAACGCGGTC ATCTTAGGCTTCATTACGACAACTATTGGGACCGTCATTGGCATGTTCTTGATGCCTGTTTTCGGACTCGCGGTCATTCT GCCGGGGATGTTAACTAACTTCTTCGCTGGCGGGACTGCAGGGATCTTCGGAAACGTTGTCGGCGGCCGCCGCGGGGCCA TCATTGGCGGCATTATCCACGGCCTGTTCATCACCTTGTTGCCAGCGCTGCTAGTCACGGCCTTGACCTCGTTTGGCTTC GTGAATGCTTCGGCAACTGACTCCGATACGATCGTGGCCATGCTGATGTATGCCTGGATCCTAACGCCGATTCTTAAAGC AGTTTAA
Upstream 100 bases:
>100_bases AGCGGTCTTGGATGTGATGGTCGGGCTTTGGCCATTGCATCCAAGGTCCCTACGTGGCGGTTGCTGCGCCAGTGATCGCG TTTAAAAGGGGGAATCAATC
Downstream 100 bases:
>100_bases AGAAAGGGGCACGACTATGTTTGGCAGTTTATTTAAAAAGAAAGACACGCAGAGACACCCATCCGCGGTGCCAAAAGAAG GCAATCAATCACTTTCGACA
Product: PTS system ascorbate-specific transporter subunit IIC
Products: NA
Alternate protein names: Ascorbate-specific PTS system EIIC component [H]
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MVVVNFIIQNILTQAAITIALIAMLGLLLQRKSFGAVLTGTFKTLLGFQVLSAGSAIIVTALTYFGKIFQHGFHLKGVVP SIEAINGQAMNTLGLGNEIALTFLGIFIVNIIIARFSPWKYIFLTGQALLWMSTMTVVGGKIAGFNSVVTIAVGSVIGGI FAVAMPAIAQPFVRKITKGDAIALGHFCTIGYMVEAGAAWIFGERGEKKHSIEDIKLPKYMEFLQDTYLSVAVVMVPLFM ITAAFAGPKYAGNGTSLNYIMNAFMMGIQFVVGVYVLLAGVRLLLGEIVPAFRGIAMKLVPNAKPALDCPVLFPFSPNAV ILGFITTTIGTVIGMFLMPVFGLAVILPGMLTNFFAGGTAGIFGNVVGGRRGAIIGGIIHGLFITLLPALLVTALTSFGF VNASATDSDTIVAMLMYAWILTPILKAV
Sequences:
>Translated_428_residues MVVVNFIIQNILTQAAITIALIAMLGLLLQRKSFGAVLTGTFKTLLGFQVLSAGSAIIVTALTYFGKIFQHGFHLKGVVP SIEAINGQAMNTLGLGNEIALTFLGIFIVNIIIARFSPWKYIFLTGQALLWMSTMTVVGGKIAGFNSVVTIAVGSVIGGI FAVAMPAIAQPFVRKITKGDAIALGHFCTIGYMVEAGAAWIFGERGEKKHSIEDIKLPKYMEFLQDTYLSVAVVMVPLFM ITAAFAGPKYAGNGTSLNYIMNAFMMGIQFVVGVYVLLAGVRLLLGEIVPAFRGIAMKLVPNAKPALDCPVLFPFSPNAV ILGFITTTIGTVIGMFLMPVFGLAVILPGMLTNFFAGGTAGIFGNVVGGRRGAIIGGIIHGLFITLLPALLVTALTSFGF VNASATDSDTIVAMLMYAWILTPILKAV >Mature_428_residues MVVVNFIIQNILTQAAITIALIAMLGLLLQRKSFGAVLTGTFKTLLGFQVLSAGSAIIVTALTYFGKIFQHGFHLKGVVP SIEAINGQAMNTLGLGNEIALTFLGIFIVNIIIARFSPWKYIFLTGQALLWMSTMTVVGGKIAGFNSVVTIAVGSVIGGI FAVAMPAIAQPFVRKITKGDAIALGHFCTIGYMVEAGAAWIFGERGEKKHSIEDIKLPKYMEFLQDTYLSVAVVMVPLFM ITAAFAGPKYAGNGTSLNYIMNAFMMGIQFVVGVYVLLAGVRLLLGEIVPAFRGIAMKLVPNAKPALDCPVLFPFSPNAV ILGFITTTIGTVIGMFLMPVFGLAVILPGMLTNFFAGGTAGIFGNVVGGRRGAIIGGIIHGLFITLLPALLVTALTSFGF VNASATDSDTIVAMLMYAWILTPILKAV
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active- transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG3037
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ulaA family [H]
Homologues:
Organism=Escherichia coli, GI87082388, Length=385, Percent_Identity=26.4935064935065, Blast_Score=133, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004703 [H]
Pfam domain/function: PF03611 EIIC-GAT [H]
EC number: NA
Molecular weight: Translated: 45332; Mature: 45332
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVVNFIIQNILTQAAITIALIAMLGLLLQRKSFGAVLTGTFKTLLGFQVLSAGSAIIVT CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH ALTYFGKIFQHGFHLKGVVPSIEAINGQAMNTLGLGNEIALTFLGIFIVNIIIARFSPWK HHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCE YIFLTGQALLWMSTMTVVGGKIAGFNSVVTIAVGSVIGGIFAVAMPAIAQPFVRKITKGD EEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AIALGHFCTIGYMVEAGAAWIFGERGEKKHSIEDIKLPKYMEFLQDTYLSVAVVMVPLFM CEEHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ITAAFAGPKYAGNGTSLNYIMNAFMMGIQFVVGVYVLLAGVRLLLGEIVPAFRGIAMKLV HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC PNAKPALDCPVLFPFSPNAVILGFITTTIGTVIGMFLMPVFGLAVILPGMLTNFFAGGTA CCCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH GIFGNVVGGRRGAIIGGIIHGLFITLLPALLVTALTSFGFVNASATDSDTIVAMLMYAWI HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH LTPILKAV HHHHHHCC >Mature Secondary Structure MVVVNFIIQNILTQAAITIALIAMLGLLLQRKSFGAVLTGTFKTLLGFQVLSAGSAIIVT CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH ALTYFGKIFQHGFHLKGVVPSIEAINGQAMNTLGLGNEIALTFLGIFIVNIIIARFSPWK HHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCE YIFLTGQALLWMSTMTVVGGKIAGFNSVVTIAVGSVIGGIFAVAMPAIAQPFVRKITKGD EEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AIALGHFCTIGYMVEAGAAWIFGERGEKKHSIEDIKLPKYMEFLQDTYLSVAVVMVPLFM CEEHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ITAAFAGPKYAGNGTSLNYIMNAFMMGIQFVVGVYVLLAGVRLLLGEIVPAFRGIAMKLV HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC PNAKPALDCPVLFPFSPNAVILGFITTTIGTVIGMFLMPVFGLAVILPGMLTNFFAGGTA CCCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH GIFGNVVGGRRGAIIGGIIHGLFITLLPALLVTALTSFGFVNASATDSDTIVAMLMYAWI HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH LTPILKAV HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]