Click here to switch to the map view.

The map label for this gene is 116493888

Identifier: 116493888

GI number: 116493888

Start: 320661

End: 321350

Strand: Direct

Name: 116493888

Synonym: LSEI_0320

Alternate gene names: NA

Gene position: 320661-321350 (Clockwise)

Preceding gene: 116493887

Following gene: 116493889

Centisome position: 11.08

GC content: 41.88

Gene sequence:

>690_bases
ATGTTGCAAAAGCTGAGAAACTCGACTTTTGTCGCGATAGTTTTGGCTGCCAGAGGAACGCTTCTGATATGCTGTCTATT
GCTCTTCTGCTATTTACTATTTTCAACTTTGACAAATACGTTTTTAATTCCCACGAACGACCTTTTAGGGGATGTGGCTT
CAATTTTAAAAGGAGAACTCTGGCGCGTTATAACGAGTACTGTGTACTTTTCTGAATGGACGCCCTTAATTAAGACGGTT
CTTATAGTTTTGGTCCTTTGCCCCTTTATAGAATGGAAAATTGGCAGTCCTGTGCTTGTTATGAGCTTTTTTGCTTCTAG
TTGGATCGGCATTTTGTTATTTTGCTTTGGATTTGGCGGTATCATTCGGTCAACAGTTGGCATAAACACCTACGTTTATG
CTTTTTATGGCGGCACACTGTCAGTCTATGCGTTATTTCCACTGGCAGTATTAGCGTTCTTGATAAAGAAACCTGCCTTT
TCTTTGTTGGCAAAGTGCGTTTTAGTTGGCGGTCTTCTGTTGTACTTTACAGTGGGGTTTTGGCCGAATTCAGATACACC
AGAGCCTGCAGTCATTGTACAGATTAGTCAATTATGCGGTGTTCTTTCCGGCCTTTTCTGTGCCCTTATAGTCGTGGCGC
TAAGAAATTGGAAGAAAGTTCCCTTCTTTTCTGCCAAACCGAGCAACTGA

Upstream 100 bases:

>100_bases
AGGCGGATCTGAGCAAATCCGCCTTTTTGAATACTTATCAATGAGCCAATATGTTTGCAACTTCGTAGGTTTGACTTGAA
AGAGAAAATGGGTGACTTTT

Downstream 100 bases:

>100_bases
TCTTATAAGACTTAAGAAAATTTGGTGCTAATGATGCTAATGAAAAGAAAACGGGTGAATTTTATGTTGTTAAAGTTGAG
AAGACCCAATCTTTTATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MLQKLRNSTFVAIVLAARGTLLICCLLLFCYLLFSTLTNTFLIPTNDLLGDVASILKGELWRVITSTVYFSEWTPLIKTV
LIVLVLCPFIEWKIGSPVLVMSFFASSWIGILLFCFGFGGIIRSTVGINTYVYAFYGGTLSVYALFPLAVLAFLIKKPAF
SLLAKCVLVGGLLLYFTVGFWPNSDTPEPAVIVQISQLCGVLSGLFCALIVVALRNWKKVPFFSAKPSN

Sequences:

>Translated_229_residues
MLQKLRNSTFVAIVLAARGTLLICCLLLFCYLLFSTLTNTFLIPTNDLLGDVASILKGELWRVITSTVYFSEWTPLIKTV
LIVLVLCPFIEWKIGSPVLVMSFFASSWIGILLFCFGFGGIIRSTVGINTYVYAFYGGTLSVYALFPLAVLAFLIKKPAF
SLLAKCVLVGGLLLYFTVGFWPNSDTPEPAVIVQISQLCGVLSGLFCALIVVALRNWKKVPFFSAKPSN
>Mature_229_residues
MLQKLRNSTFVAIVLAARGTLLICCLLLFCYLLFSTLTNTFLIPTNDLLGDVASILKGELWRVITSTVYFSEWTPLIKTV
LIVLVLCPFIEWKIGSPVLVMSFFASSWIGILLFCFGFGGIIRSTVGINTYVYAFYGGTLSVYALFPLAVLAFLIKKPAF
SLLAKCVLVGGLLLYFTVGFWPNSDTPEPAVIVQISQLCGVLSGLFCALIVVALRNWKKVPFFSAKPSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25191; Mature: 25191

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKLRNSTFVAIVLAARGTLLICCLLLFCYLLFSTLTNTFLIPTNDLLGDVASILKGEL
CCCHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHH
WRVITSTVYFSEWTPLIKTVLIVLVLCPFIEWKIGSPVLVMSFFASSWIGILLFCFGFGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IIRSTVGINTYVYAFYGGTLSVYALFPLAVLAFLIKKPAFSLLAKCVLVGGLLLYFTVGF
HHHHHHCCHHEEEEEECCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC
WPNSDTPEPAVIVQISQLCGVLSGLFCALIVVALRNWKKVPFFSAKPSN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLQKLRNSTFVAIVLAARGTLLICCLLLFCYLLFSTLTNTFLIPTNDLLGDVASILKGEL
CCCHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHH
WRVITSTVYFSEWTPLIKTVLIVLVLCPFIEWKIGSPVLVMSFFASSWIGILLFCFGFGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IIRSTVGINTYVYAFYGGTLSVYALFPLAVLAFLIKKPAFSLLAKCVLVGGLLLYFTVGF
HHHHHHCCHHEEEEEECCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC
WPNSDTPEPAVIVQISQLCGVLSGLFCALIVVALRNWKKVPFFSAKPSN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA