| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is livK [C]
Identifier: 116493833
GI number: 116493833
Start: 266877
End: 268070
Strand: Direct
Name: livK [C]
Synonym: LSEI_0265
Alternate gene names: 116493833
Gene position: 266877-268070 (Clockwise)
Preceding gene: 116493831
Following gene: 116493834
Centisome position: 9.22
GC content: 47.82
Gene sequence:
>1194_bases ATGAAGAAGCAAATTGTCAAAGCAATTATGAGCGCTGGCGTCATCGCAGCTTCGATGCTGGCATTGGCAGGCTGTGCGAC AAAGAGTGCCACGAGCAAAGGAAATACGGCAGGTAACACGATTAAAATCGGCGTGAACATGGAGTTGTCTGGCGCGGTTG CTGGTTACGGCGAACAGCAGAAACAAGGCATTGAATTGGCCGTGAAACAGATTAACGCTGCAGGTGGTATTAAGGTCGGA AATACTAAGAAAAAAATAACGGCGGTCTATCGTGACAACAAATCGTCAACGAGCGGCGCGGCTTCAGTAGCTGCACAGCT GGCGAATACTGACAAAGTGGTTGCGATCGTTGGACCGGCGACAACCAATGACGGAACAGCCTCTATTCCAAACGTGACCA AGGCGGCCGTACCAATGGTGAGTCCCAGTGCTACGGATCCAAACTTTACACTTCAGAAAAATGGCAGCGTGCAACCCTAC GTTTTCCGTGCTTGCTTCAATAACGATTTTCAAGGAGACCATGCGGCGATATTTGCCAACGATACCTTGAAGGCCAAAAA CGTGGCGATTATTGCTGACAACTCGACTGATTACGGAACCGGGTTGGCTAAGGCATTCAAGAAGAAGTTTAAAGGTAATA TTGTGACGACTCAGTATTATCAATCAGGTGATAAAGATTTCAATGCTATGCTGACAACGATCAAAAGCAAGAAAATTGAT GCCATCTATGCGCCGGGCTATTATTCAGAATTAGGCCTCGTCATCAAGCAAGCCCGGCAGTCAGGCATCAAGGTACCGTT TATTGGTGCAGATGGCATGGCCGATCCTAAGTTGGCACAAATCGCCGGCGCTGCGAATGCAACTGATATTTATTACACCA CGCCATTTTCGACGCTGAGTGCTAACAGCAGCAAGCTGGTGAAGAACTTTATGACCAGCTTTAAGAAGCAGTATCAAACA GAAGCACCAACGTTCTCAGCACTTGCCTATGATTCGGTTTACATGATCAAGCAAGCGATTGAAGATCAGAAGGCTGCCGA TTCAGCCAGCATTGCCAAGGGCTTGGCCAAGATCAAACAAATGCCTGCTGTGACAGGCACCACGACCATTGATAGTCACC ATAATCCTGAGAAGCCGCTGGCGGTTGAGCAACTGACACAAGGCAAAATCGCCAAAGTCTATACCGTTAAGTAA
Upstream 100 bases:
>100_bases ATGGGGCGTACGATTAGCACCCATTCGTCTGAATGGGTGCTTTTTTCTGTTAAGAATCAATGAGATATAGTCATAAGCAA TATAATGAGGGGGAACCAAG
Downstream 100 bases:
>100_bases ATGACTGCGGAAGCTTTTTATGAGGAGATCATATTTTGCAAACCTTGATGCAACAAATCATTAATGGACTCTCACTTGGC AGTATTTACGCTTTACTCGC
Product: ABC-type branched-chain amino acid transport system, periplasmic component
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MKKQIVKAIMSAGVIAASMLALAGCATKSATSKGNTAGNTIKIGVNMELSGAVAGYGEQQKQGIELAVKQINAAGGIKVG NTKKKITAVYRDNKSSTSGAASVAAQLANTDKVVAIVGPATTNDGTASIPNVTKAAVPMVSPSATDPNFTLQKNGSVQPY VFRACFNNDFQGDHAAIFANDTLKAKNVAIIADNSTDYGTGLAKAFKKKFKGNIVTTQYYQSGDKDFNAMLTTIKSKKID AIYAPGYYSELGLVIKQARQSGIKVPFIGADGMADPKLAQIAGAANATDIYYTTPFSTLSANSSKLVKNFMTSFKKQYQT EAPTFSALAYDSVYMIKQAIEDQKAADSASIAKGLAKIKQMPAVTGTTTIDSHHNPEKPLAVEQLTQGKIAKVYTVK
Sequences:
>Translated_397_residues MKKQIVKAIMSAGVIAASMLALAGCATKSATSKGNTAGNTIKIGVNMELSGAVAGYGEQQKQGIELAVKQINAAGGIKVG NTKKKITAVYRDNKSSTSGAASVAAQLANTDKVVAIVGPATTNDGTASIPNVTKAAVPMVSPSATDPNFTLQKNGSVQPY VFRACFNNDFQGDHAAIFANDTLKAKNVAIIADNSTDYGTGLAKAFKKKFKGNIVTTQYYQSGDKDFNAMLTTIKSKKID AIYAPGYYSELGLVIKQARQSGIKVPFIGADGMADPKLAQIAGAANATDIYYTTPFSTLSANSSKLVKNFMTSFKKQYQT EAPTFSALAYDSVYMIKQAIEDQKAADSASIAKGLAKIKQMPAVTGTTTIDSHHNPEKPLAVEQLTQGKIAKVYTVK >Mature_397_residues MKKQIVKAIMSAGVIAASMLALAGCATKSATSKGNTAGNTIKIGVNMELSGAVAGYGEQQKQGIELAVKQINAAGGIKVG NTKKKITAVYRDNKSSTSGAASVAAQLANTDKVVAIVGPATTNDGTASIPNVTKAAVPMVSPSATDPNFTLQKNGSVQPY VFRACFNNDFQGDHAAIFANDTLKAKNVAIIADNSTDYGTGLAKAFKKKFKGNIVTTQYYQSGDKDFNAMLTTIKSKKID AIYAPGYYSELGLVIKQARQSGIKVPFIGADGMADPKLAQIAGAANATDIYYTTPFSTLSANSSKLVKNFMTSFKKQYQT EAPTFSALAYDSVYMIKQAIEDQKAADSASIAKGLAKIKQMPAVTGTTTIDSHHNPEKPLAVEQLTQGKIAKVYTVK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=357, Percent_Identity=30.812324929972, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1789867, Length=288, Percent_Identity=31.5972222222222, Blast_Score=124, Evalue=2e-29,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 41746; Mature: 41746
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQIVKAIMSAGVIAASMLALAGCATKSATSKGNTAGNTIKIGVNMELSGAVAGYGEQQ CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHH KQGIELAVKQINAAGGIKVGNTKKKITAVYRDNKSSTSGAASVAAQLANTDKVVAIVGPA HHHHHHHHHHHHCCCCEEECCCHHEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCC TTNDGTASIPNVTKAAVPMVSPSATDPNFTLQKNGSVQPYVFRACFNNDFQGDHAAIFAN CCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEC DTLKAKNVAIIADNSTDYGTGLAKAFKKKFKGNIVTTQYYQSGDKDFNAMLTTIKSKKID CCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHHCCCCC AIYAPGYYSELGLVIKQARQSGIKVPFIGADGMADPKLAQIAGAANATDIYYTTPFSTLS EEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEECCCHHCC ANSSKLVKNFMTSFKKQYQTEAPTFSALAYDSVYMIKQAIEDQKAADSASIAKGLAKIKQ CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH MPAVTGTTTIDSHHNPEKPLAVEQLTQGKIAKVYTVK CCCCCCCEEECCCCCCCCCHHHHHHCCCCEEEEEEEC >Mature Secondary Structure MKKQIVKAIMSAGVIAASMLALAGCATKSATSKGNTAGNTIKIGVNMELSGAVAGYGEQQ CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHH KQGIELAVKQINAAGGIKVGNTKKKITAVYRDNKSSTSGAASVAAQLANTDKVVAIVGPA HHHHHHHHHHHHCCCCEEECCCHHEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCC TTNDGTASIPNVTKAAVPMVSPSATDPNFTLQKNGSVQPYVFRACFNNDFQGDHAAIFAN CCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEC DTLKAKNVAIIADNSTDYGTGLAKAFKKKFKGNIVTTQYYQSGDKDFNAMLTTIKSKKID CCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHHCCCCC AIYAPGYYSELGLVIKQARQSGIKVPFIGADGMADPKLAQIAGAANATDIYYTTPFSTLS EEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEECCCHHCC ANSSKLVKNFMTSFKKQYQTEAPTFSALAYDSVYMIKQAIEDQKAADSASIAKGLAKIKQ CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH MPAVTGTTTIDSHHNPEKPLAVEQLTQGKIAKVYTVK CCCCCCCEEECCCCCCCCCHHHHHHCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]