Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493830

Identifier: 116493830

GI number: 116493830

Start: 264946

End: 265722

Strand: Direct

Name: 116493830

Synonym: LSEI_0262

Alternate gene names: NA

Gene position: 264946-265722 (Clockwise)

Preceding gene: 116493829

Following gene: 116493831

Centisome position: 9.15

GC content: 47.88

Gene sequence:

>777_bases
ATGACACATTCAGTTGAGCGTCAGGATACAGCAATCCAAAATCAAGTATTGGCAACATGCTTGCTTGCTGGACGCATTAT
GATTGAAGGCGGTTCGGAAATGTATCGTGTTGAAGATACGATGCGACGAATTGCTGTGAATGCCGGTGAGCCACAAACGT
TGGTGTTTACGACGCCAACCGGTATATTTGCTAGCATCGAAAATCAGCCGTATATTCAGGAGCGGCCGATTAGCAAACGA
TCGATTGATATGGAAAAAGTGACGCGCGTGAATCAACTCTCTCGTTCGTTTGCGGCTGATCAGATTGATCTAGATGAATT
GCACGCGGCATTGATCAAACTGGATCAGAACACCCCTTTTTTCCCGATTTGGTTGCAGGTGGTGAGCGCGGCAGTTGTCA
GCATGACACTCATGGTGTTATTTGCTCAACAGTATGACTGGCTTGATATGCCTTTGGCAGCTGCGGTCGGTGCATTGGGC
TTTCTAGTTGATATCAAAGTGAATGCAGTGACCAACATTCGGTTTATTAGTGAATTACTGGGCGCATTGGTCGTTGGCTT
AACTGCGTGGCTTGGGGTCAGGTTAGGCCTAGGACACAACCTGGACTTTATTATTATTGGAGCGATTATGCCGCTTGTAC
CGGGGGTAGCGATTACCAATTCGATTCGCGATATGCTGGCGGGACATTTGCTGTCCGGTATGGCCCGCGGGATGGAAGCC
ATTTTGAGCGCTTGTGCTATCGGTGTTGGTATTGCTATGATCTTCCGGTTCTTCTAA

Upstream 100 bases:

>100_bases
TAGTCATTTATCAGCAAGGAGAGGCGCGCGAAAAAGTGACAGGTGTTTACCCTAAAGACAAACTTAAACGGTATTTTGAA
CAGAAACTTGAGGCGTAGGT

Downstream 100 bases:

>100_bases
AAACATAAAGGAGGCGGCATCTTGCAGTGGTGGTTTGCTTTATTAGTTCAACTTTTGTTCAGTTATTTGGCAACGGTCGC
TTTTGCTATCATTATCAACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTHSVERQDTAIQNQVLATCLLAGRIMIEGGSEMYRVEDTMRRIAVNAGEPQTLVFTTPTGIFASIENQPYIQERPISKR
SIDMEKVTRVNQLSRSFAADQIDLDELHAALIKLDQNTPFFPIWLQVVSAAVVSMTLMVLFAQQYDWLDMPLAAAVGALG
FLVDIKVNAVTNIRFISELLGALVVGLTAWLGVRLGLGHNLDFIIIGAIMPLVPGVAITNSIRDMLAGHLLSGMARGMEA
ILSACAIGVGIAMIFRFF

Sequences:

>Translated_258_residues
MTHSVERQDTAIQNQVLATCLLAGRIMIEGGSEMYRVEDTMRRIAVNAGEPQTLVFTTPTGIFASIENQPYIQERPISKR
SIDMEKVTRVNQLSRSFAADQIDLDELHAALIKLDQNTPFFPIWLQVVSAAVVSMTLMVLFAQQYDWLDMPLAAAVGALG
FLVDIKVNAVTNIRFISELLGALVVGLTAWLGVRLGLGHNLDFIIIGAIMPLVPGVAITNSIRDMLAGHLLSGMARGMEA
ILSACAIGVGIAMIFRFF
>Mature_257_residues
THSVERQDTAIQNQVLATCLLAGRIMIEGGSEMYRVEDTMRRIAVNAGEPQTLVFTTPTGIFASIENQPYIQERPISKRS
IDMEKVTRVNQLSRSFAADQIDLDELHAALIKLDQNTPFFPIWLQVVSAAVVSMTLMVLFAQQYDWLDMPLAAAVGALGF
LVDIKVNAVTNIRFISELLGALVVGLTAWLGVRLGLGHNLDFIIIGAIMPLVPGVAITNSIRDMLAGHLLSGMARGMEAI
LSACAIGVGIAMIFRFF

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28146; Mature: 28014

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHSVERQDTAIQNQVLATCLLAGRIMIEGGSEMYRVEDTMRRIAVNAGEPQTLVFTTPT
CCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCEEEEECCC
GIFASIENQPYIQERPISKRSIDMEKVTRVNQLSRSFAADQIDLDELHAALIKLDQNTPF
CEEEECCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
FPIWLQVVSAAVVSMTLMVLFAQQYDWLDMPLAAAVGALGFLVDIKVNAVTNIRFISELL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEEHHHHHHHHHHHHH
GALVVGLTAWLGVRLGLGHNLDFIIIGAIMPLVPGVAITNSIRDMLAGHLLSGMARGMEA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ILSACAIGVGIAMIFRFF
HHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
THSVERQDTAIQNQVLATCLLAGRIMIEGGSEMYRVEDTMRRIAVNAGEPQTLVFTTPT
CCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCEEEEECCC
GIFASIENQPYIQERPISKRSIDMEKVTRVNQLSRSFAADQIDLDELHAALIKLDQNTPF
CEEEECCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
FPIWLQVVSAAVVSMTLMVLFAQQYDWLDMPLAAAVGALGFLVDIKVNAVTNIRFISELL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEEHHHHHHHHHHHHH
GALVVGLTAWLGVRLGLGHNLDFIIIGAIMPLVPGVAITNSIRDMLAGHLLSGMARGMEA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ILSACAIGVGIAMIFRFF
HHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA