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The map label for this gene is 116493823

Identifier: 116493823

GI number: 116493823

Start: 253256

End: 253999

Strand: Direct

Name: 116493823

Synonym: LSEI_0252

Alternate gene names: NA

Gene position: 253256-253999 (Clockwise)

Preceding gene: 116493822

Following gene: 116493824

Centisome position: 8.75

GC content: 44.89

Gene sequence:

>744_bases
TTGACAGAACATTTAATGACTTATCGTCAGCTTAAGCAAAAAGCAAAAGGGCAATTAAAAGAAGGCACGAATCGGCGCGA
TTTGATGCTGGCTTATTTGTTACCGAGTTTAATTCAGGCAGCTGTCGCTATCATCACGTACTTGATGGTCTTCGCCTTAA
TTCAAAAATTCGGCATTGACAAAGCTTTGACTGATCCAGATGGATTCCAGAATTATCTGCAAAGTGGCAATCGTACCGGA
AGTATGAATACGATTCAAAGCCTGGTCAATACGATGCTGATTCAAGGGGTCAATTTTGGCGTGCTAGATCTTGTACGCCG
TAAAGAGCGAGTTCAACCACTGCATGCGCTGCTAGGCCTATTTAACGGTCAGTGGTTCTGGGGTGCCATCTCATTATGGA
TCTTTATGTATTTCTTGACGTTGATGGGGCTGTCATTTTTCTTGATTCCTGGAATACTACTTGCATTGGGCTGGCGTCAG
GCCTTTTGGGTCTTTAAAGATGGTCATGAAACCAATCAGCGCTTTTCCTCGATATCGGCGTTGATCGGTTCTTGGCGACT
GATGCGCGGCTTCAAAGGCGATTTGCTCGGCCTGTATGTTTCCATGATCGGTTGGTATCTTCTGGAAAACATCACGTTCC
ATTTATTTGACTGGGCGATCAATCCATACTTGCAATTGGTTCACGCTAACTATTATGAAAATCGGCGCGCCTACAAGATC
GCGGCTCAAGCGGCTCAATCATGA

Upstream 100 bases:

>100_bases
TTGGCGGATTCATCAAGTTTTACGAGTCGCACGACGAACAGAAAAGGTCACTAAGAAAGAGGCAATTAAGATTGAACATT
GATCATTGGAGGCGCGGGCG

Downstream 100 bases:

>100_bases
CTAAAGCTGAATTGTTGTCGCCAGCTGCGAGACGGGGTATACTGACCGCGATCTCAACAAAGTGAATTGTATATCGGTAT
TAGCATTTTGAAGGTGAGGC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTEHLMTYRQLKQKAKGQLKEGTNRRDLMLAYLLPSLIQAAVAIITYLMVFALIQKFGIDKALTDPDGFQNYLQSGNRTG
SMNTIQSLVNTMLIQGVNFGVLDLVRRKERVQPLHALLGLFNGQWFWGAISLWIFMYFLTLMGLSFFLIPGILLALGWRQ
AFWVFKDGHETNQRFSSISALIGSWRLMRGFKGDLLGLYVSMIGWYLLENITFHLFDWAINPYLQLVHANYYENRRAYKI
AAQAAQS

Sequences:

>Translated_247_residues
MTEHLMTYRQLKQKAKGQLKEGTNRRDLMLAYLLPSLIQAAVAIITYLMVFALIQKFGIDKALTDPDGFQNYLQSGNRTG
SMNTIQSLVNTMLIQGVNFGVLDLVRRKERVQPLHALLGLFNGQWFWGAISLWIFMYFLTLMGLSFFLIPGILLALGWRQ
AFWVFKDGHETNQRFSSISALIGSWRLMRGFKGDLLGLYVSMIGWYLLENITFHLFDWAINPYLQLVHANYYENRRAYKI
AAQAAQS
>Mature_246_residues
TEHLMTYRQLKQKAKGQLKEGTNRRDLMLAYLLPSLIQAAVAIITYLMVFALIQKFGIDKALTDPDGFQNYLQSGNRTGS
MNTIQSLVNTMLIQGVNFGVLDLVRRKERVQPLHALLGLFNGQWFWGAISLWIFMYFLTLMGLSFFLIPGILLALGWRQA
FWVFKDGHETNQRFSSISALIGSWRLMRGFKGDLLGLYVSMIGWYLLENITFHLFDWAINPYLQLVHANYYENRRAYKIA
AQAAQS

Specific function: Unknown

COG id: COG5523

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28432; Mature: 28301

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCC
>Mature Secondary Structure 
TEHLMTYRQLKQKAKGQLKEGTNRRDLMLAYLLPSLIQAAVAIITYLMVFALIQKFGID
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KALTDPDGFQNYLQSGNRTGSMNTIQSLVNTMLIQGVNFGVLDLVRRKERVQPLHALLGL
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FNGQWFWGAISLWIFMYFLTLMGLSFFLIPGILLALGWRQAFWVFKDGHETNQRFSSISA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LIGSWRLMRGFKGDLLGLYVSMIGWYLLENITFHLFDWAINPYLQLVHANYYENRRAYKI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAQAAQS
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA