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The map label for this gene is soj [H]

Identifier: 116493783

GI number: 116493783

Start: 207197

End: 207964

Strand: Direct

Name: soj [H]

Synonym: LSEI_0212

Alternate gene names: 116493783

Gene position: 207197-207964 (Clockwise)

Preceding gene: 116493782

Following gene: 116493784

Centisome position: 7.16

GC content: 49.48

Gene sequence:

>768_bases
ATGGCACATATCATCGCAGTCGCTAACCAAAAAGGCGGCGTTGGCAAAACCACCACCACGGTCAATCTGGGCGCCTGTTT
GGCCAACCTTGGCAAGAAGATTTTGATTGTGGACGCTGATGCACAAGGCAATGCGACTAGTGGCGTCGGCGTTCAAAAGG
CCCAAGTTGAAAAGGATATTTATGATGTGCTAGTCAACGAAGAGCCGATTACCGAAGCCATTCTGCCAACGAAACATAAG
AACATGTCGATTGTGCCAGCCACCATTCAACTGGCTGGCGCTGAGATCGAGTTAACCAGCCAAATGGCGCGTGAAATGCG
ATTGAAGCTGGGATTGCATCCTGTGGAGGATCAATACGATTATATTTTGATTGATTGCCCGCCATCGCTTGGCCAATTGT
CGATCAATGCATTTACAGCAAGCGACTCGATTTTAATCCCGGTCCAAAGCGAATATTACGCTCTGGAGGGCTTAAGCCAG
TTACTAAACACGGTGCGGTTGGTTCAGAAACACTTTAATCCGAGCTTAGCGATCGAAGGGGTGTTGTTGACAATGTATGA
TGCGCGGACCAATCTCGGCGCACAAGTCATTGACGAGGTCCGCAAGTATTTTGGCGATAAAGTATATGCAACGGTGATTC
CGCGGATTACGCGATTGGCGGAGGCGCCAAGCTATGGTCTGCCAATTGTGGATTTTGATCCAAAGTCCCGGGGATCAGAG
GTTTACGAGGCTTTAGCCAAGGAGGTGCTGGCTGCTCATGGCGAATAA

Upstream 100 bases:

>100_bases
CCGGGAAACCGGTATGACGGTCACAGCAAAAGAAGAAGATACTGACGACGCTTACCGAATGATCATCGAGATTCCGAAAG
AAAAGAGATAGGAGGAGCTC

Downstream 100 bases:

>100_bases
GAATAACAAAGGCTTAGGCCGTGGTATTGATGCGATTTTCAAAGATTTCGAAAGTCCAGATCTGAGTGCCAATAATACAG
TTGAAGAATTACCGCTGATT

Product: chromosome partitioning ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MAHIIAVANQKGGVGKTTTTVNLGACLANLGKKILIVDADAQGNATSGVGVQKAQVEKDIYDVLVNEEPITEAILPTKHK
NMSIVPATIQLAGAEIELTSQMAREMRLKLGLHPVEDQYDYILIDCPPSLGQLSINAFTASDSILIPVQSEYYALEGLSQ
LLNTVRLVQKHFNPSLAIEGVLLTMYDARTNLGAQVIDEVRKYFGDKVYATVIPRITRLAEAPSYGLPIVDFDPKSRGSE
VYEALAKEVLAAHGE

Sequences:

>Translated_255_residues
MAHIIAVANQKGGVGKTTTTVNLGACLANLGKKILIVDADAQGNATSGVGVQKAQVEKDIYDVLVNEEPITEAILPTKHK
NMSIVPATIQLAGAEIELTSQMAREMRLKLGLHPVEDQYDYILIDCPPSLGQLSINAFTASDSILIPVQSEYYALEGLSQ
LLNTVRLVQKHFNPSLAIEGVLLTMYDARTNLGAQVIDEVRKYFGDKVYATVIPRITRLAEAPSYGLPIVDFDPKSRGSE
VYEALAKEVLAAHGE
>Mature_254_residues
AHIIAVANQKGGVGKTTTTVNLGACLANLGKKILIVDADAQGNATSGVGVQKAQVEKDIYDVLVNEEPITEAILPTKHKN
MSIVPATIQLAGAEIELTSQMAREMRLKLGLHPVEDQYDYILIDCPPSLGQLSINAFTASDSILIPVQSEYYALEGLSQL
LNTVRLVQKHFNPSLAIEGVLLTMYDARTNLGAQVIDEVRKYFGDKVYATVIPRITRLAEAPSYGLPIVDFDPKSRGSEV
YEALAKEVLAAHGE

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27573; Mature: 27442

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHIIAVANQKGGVGKTTTTVNLGACLANLGKKILIVDADAQGNATSGVGVQKAQVEKDI
CCEEEEEECCCCCCCCCEEEEEHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH
YDVLVNEEPITEAILPTKHKNMSIVPATIQLAGAEIELTSQMAREMRLKLGLHPVEDQYD
HHHHCCCCCCHHHHCCCCCCCCEEEEEEEEEECCEEEHHHHHHHHHHHHHCCCCCCCCCC
YILIDCPPSLGQLSINAFTASDSILIPVQSEYYALEGLSQLLNTVRLVQKHFNPSLAIEG
EEEEECCCCCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECE
VLLTMYDARTNLGAQVIDEVRKYFGDKVYATVIPRITRLAEAPSYGLPIVDFDPKSRGSE
EEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHH
VYEALAKEVLAAHGE
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
AHIIAVANQKGGVGKTTTTVNLGACLANLGKKILIVDADAQGNATSGVGVQKAQVEKDI
CEEEEEECCCCCCCCCEEEEEHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH
YDVLVNEEPITEAILPTKHKNMSIVPATIQLAGAEIELTSQMAREMRLKLGLHPVEDQYD
HHHHCCCCCCHHHHCCCCCCCCEEEEEEEEEECCEEEHHHHHHHHHHHHHCCCCCCCCCC
YILIDCPPSLGQLSINAFTASDSILIPVQSEYYALEGLSQLLNTVRLVQKHFNPSLAIEG
EEEEECCCCCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECE
VLLTMYDARTNLGAQVIDEVRKYFGDKVYATVIPRITRLAEAPSYGLPIVDFDPKSRGSE
EEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHH
VYEALAKEVLAAHGE
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]