| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116493764
Identifier: 116493764
GI number: 116493764
Start: 195204
End: 195509
Strand: Direct
Name: 116493764
Synonym: LSEI_0193
Alternate gene names: NA
Gene position: 195204-195509 (Clockwise)
Preceding gene: 116493761
Following gene: 116493765
Centisome position: 6.74
GC content: 42.16
Gene sequence:
>306_bases ATGGAACACTATGCTTATCTACAGGACTTGGCAGCTGATCAAAATGATCGGCAATTGCGAGTTCGAATTTGGGACAATAA GAATATCATCATTCGGCGTAATTTGGGTCAGCAGCAAGGCTTAGCCACACAAGTCTGGGATGCTTGGCTGCGTCAAGAGT TACGACGATTTAATGGTTTTGAACCGATTATCGAAATTGATGATTTTTCGGGTCATCAGGAAATTCGGTTTTTTAAGGAA AATGAGTTGGCAGATGCCGTTCATTTCATCTTGCAAGGTGAAGGTACTGTTGAAACTGCCAGTTGA
Upstream 100 bases:
>100_bases TCTAGTTTAGCATAGACACCTAGGCGATGATGCTTCGTCGTTTGCTTGACGCAAAGACACTGTTAGCTTGCTGTCTTTTG TTGAAAGGTAAGGTGAGCTT
Downstream 100 bases:
>100_bases ACGTTTTTGTAGTGGCAACGTCGTGAGCATTCATGGAACTTGCCCGCTGTGAAAGCTGAATTTTTTAAGCATGTGCATGA AAAAACAACTTTTCGTGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MEHYAYLQDLAADQNDRQLRVRIWDNKNIIIRRNLGQQQGLATQVWDAWLRQELRRFNGFEPIIEIDDFSGHQEIRFFKE NELADAVHFILQGEGTVETAS
Sequences:
>Translated_101_residues MEHYAYLQDLAADQNDRQLRVRIWDNKNIIIRRNLGQQQGLATQVWDAWLRQELRRFNGFEPIIEIDDFSGHQEIRFFKE NELADAVHFILQGEGTVETAS >Mature_101_residues MEHYAYLQDLAADQNDRQLRVRIWDNKNIIIRRNLGQQQGLATQVWDAWLRQELRRFNGFEPIIEIDDFSGHQEIRFFKE NELADAVHFILQGEGTVETAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11958; Mature: 11958
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHYAYLQDLAADQNDRQLRVRIWDNKNIIIRRNLGQQQGLATQVWDAWLRQELRRFNGF CCHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC EPIIEIDDFSGHQEIRFFKENELADAVHFILQGEGTVETAS CCEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECC >Mature Secondary Structure MEHYAYLQDLAADQNDRQLRVRIWDNKNIIIRRNLGQQQGLATQVWDAWLRQELRRFNGF CCHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC EPIIEIDDFSGHQEIRFFKENELADAVHFILQGEGTVETAS CCEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA