| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is nox [H]
Identifier: 116493757
GI number: 116493757
Start: 189160
End: 190515
Strand: Direct
Name: nox [H]
Synonym: LSEI_0186
Alternate gene names: 116493757
Gene position: 189160-190515 (Clockwise)
Preceding gene: 116493755
Following gene: 116493758
Centisome position: 6.53
GC content: 46.68
Gene sequence:
>1356_bases ATGAAAGTTGTCGTTGTGGGCTGTACGCATGCAGGAACTGCGGCAGTGCGCGAACTGTTGATGAAGCACCCAGAGACAGA AGTGGATGTCTTTGAACGGCGGGAAGACATCTCCTTTCTTTCTTGCGGCATCGCGTTATACCTTGAAGGTACCGTTGGCC GATTGGAAGATATGTTTTATGCTACGCCAGCTTCTTTAGAGGCGCTGGGGCCGCATGTTCACGTTCATCTCAAACATGAT GTTTTAAGCATTGATGCCGCTGATCATCGGATTTTGGCCGAAAATCTTAAAACGGGCAACCAACAACATTATCAATATGA TAAATTAGTCATGGCGACAGGTAGTTATCCTGTTGTTCCGCCGATTTCAGGTGTCAGTATTCCGCGGGTGCTGATGTGTA AAAACTACGATGATGCTCGGCGAATCAAAGAAAGTGCCAAGGATGCTGAGCATATTGCGATTGTTGGTGGCGGGTATATT GGTGTCGAACTGGCGGAAGCCTATAGCCGCAACCATAAACAGGTAACGTTAATTAATGGTGTTTCGCCTTTACTTAGTCA TTATGTTGACTTACCACTTAGTCATGAAATCAGTGAGGCCCTGACAACACGTGGGGTTGAGTTGAAAGCCAACACAGTTG CCAAGCATTTTGATAGTGATGATCAGCATGTTTTTATTCAAACAGATAAAGGCGAAATACAGGCAGATTTGGCGGTGGTT TGTGTCGGGTTCCGGCCGATGACCGAGTTGCTGATCGGCCAAGTTGATATGAATCCTGATGGGTCCATTCACGTGAATGA TTATATGCAGACCAGCAATCCGGATATTTTTGCAGCTGGTGATGCGGTCGCCGTCCATTTCAATCCCACTGGTAAGGACG CTTATGCGCCTTTGGCCACCAATGCTGTGCGCCAAGGGATGATGGCTGGCGCTAACTTGTTTAAACCAACGATTAAATAT ATGGGAACGCAAGCCACAAGCGCGCTAAAGTTGTACGATCATAACTTAGGTGTGACGGGTTTGACGCTTGCTCACGCCAA GCGCAATCACCTGTCGGCTGCCAGTGTCACGATGACGGATGATTTTCGACCGCCATTCATGCCGGACACCGTCAAAATTA CGATGGTGCTCGTCTATGATACTGATGATCGCCGGATTCTGGGTGCCCAGTTTTATAGTCAATATGATATTGTAAATGCA GCTAATCTCATTTCTGTGATGATCCAAAATCGTAACACGATTGATCAGCTGGCTTATGTCGACATGCTGTTCAATCCGAA TTATGATAAACCGTGGCATTATTTGAATCTGTTAGGGCAATTGGCTGTGACGCAAGCAGATAATACGACGGCGTAG
Upstream 100 bases:
>100_bases ACTTGTAAGCGCCAGAAAGCGGTTAGCGACATGCTTTAGGTTTAGCCATTTTCGTGTCATAATGTCATTATTGACAATCT TGAAAGGAAGGCAGATGCTG
Downstream 100 bases:
>100_bases GGGGAAAATTATGAATTCGTGGAATCTTATCGGACTGTTGGCATGGGTGATACTCATCGCCTATTTGATTTTCATCGTCT GGCACATTCGGCAACGGCAC
Product: NAD(FAD)-dependent dehydrogenase
Products: NA
Alternate protein names: NOXase [H]
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MKVVVVGCTHAGTAAVRELLMKHPETEVDVFERREDISFLSCGIALYLEGTVGRLEDMFYATPASLEALGPHVHVHLKHD VLSIDAADHRILAENLKTGNQQHYQYDKLVMATGSYPVVPPISGVSIPRVLMCKNYDDARRIKESAKDAEHIAIVGGGYI GVELAEAYSRNHKQVTLINGVSPLLSHYVDLPLSHEISEALTTRGVELKANTVAKHFDSDDQHVFIQTDKGEIQADLAVV CVGFRPMTELLIGQVDMNPDGSIHVNDYMQTSNPDIFAAGDAVAVHFNPTGKDAYAPLATNAVRQGMMAGANLFKPTIKY MGTQATSALKLYDHNLGVTGLTLAHAKRNHLSAASVTMTDDFRPPFMPDTVKITMVLVYDTDDRRILGAQFYSQYDIVNA ANLISVMIQNRNTIDQLAYVDMLFNPNYDKPWHYLNLLGQLAVTQADNTTA
Sequences:
>Translated_451_residues MKVVVVGCTHAGTAAVRELLMKHPETEVDVFERREDISFLSCGIALYLEGTVGRLEDMFYATPASLEALGPHVHVHLKHD VLSIDAADHRILAENLKTGNQQHYQYDKLVMATGSYPVVPPISGVSIPRVLMCKNYDDARRIKESAKDAEHIAIVGGGYI GVELAEAYSRNHKQVTLINGVSPLLSHYVDLPLSHEISEALTTRGVELKANTVAKHFDSDDQHVFIQTDKGEIQADLAVV CVGFRPMTELLIGQVDMNPDGSIHVNDYMQTSNPDIFAAGDAVAVHFNPTGKDAYAPLATNAVRQGMMAGANLFKPTIKY MGTQATSALKLYDHNLGVTGLTLAHAKRNHLSAASVTMTDDFRPPFMPDTVKITMVLVYDTDDRRILGAQFYSQYDIVNA ANLISVMIQNRNTIDQLAYVDMLFNPNYDKPWHYLNLLGQLAVTQADNTTA >Mature_451_residues MKVVVVGCTHAGTAAVRELLMKHPETEVDVFERREDISFLSCGIALYLEGTVGRLEDMFYATPASLEALGPHVHVHLKHD VLSIDAADHRILAENLKTGNQQHYQYDKLVMATGSYPVVPPISGVSIPRVLMCKNYDDARRIKESAKDAEHIAIVGGGYI GVELAEAYSRNHKQVTLINGVSPLLSHYVDLPLSHEISEALTTRGVELKANTVAKHFDSDDQHVFIQTDKGEIQADLAVV CVGFRPMTELLIGQVDMNPDGSIHVNDYMQTSNPDIFAAGDAVAVHFNPTGKDAYAPLATNAVRQGMMAGANLFKPTIKY MGTQATSALKLYDHNLGVTGLTLAHAKRNHLSAASVTMTDDFRPPFMPDTVKITMVLVYDTDDRRILGAQFYSQYDIVNA ANLISVMIQNRNTIDQLAYVDMLFNPNYDKPWHYLNLLGQLAVTQADNTTA
Specific function: Catalyzes the four-electron reduction of molecular oxygen to water [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=247, Percent_Identity=27.9352226720648, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI226437568, Length=215, Percent_Identity=24.1860465116279, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI65787454, Length=215, Percent_Identity=24.1860465116279, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI21389617, Length=215, Percent_Identity=24.1860465116279, Blast_Score=69, Evalue=8e-12, Organism=Escherichia coli, GI1789065, Length=216, Percent_Identity=31.9444444444444, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1789765, Length=327, Percent_Identity=26.2996941896024, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1788892, Length=190, Percent_Identity=24.2105263157895, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI87082354, Length=232, Percent_Identity=26.7241379310345, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI21358499, Length=195, Percent_Identity=30.2564102564103, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24585130, Length=194, Percent_Identity=26.2886597938144, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.6.99.3 [H]
Molecular weight: Translated: 49622; Mature: 49622
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVVVVGCTHAGTAAVRELLMKHPETEVDVFERREDISFLSCGIALYLEGTVGRLEDMFY CEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECEEEEEECCHHHHHHHHC ATPASLEALGPHVHVHLKHDVLSIDAADHRILAENLKTGNQQHYQYDKLVMATGSYPVVP CCCCCHHHCCCEEEEEEECCEEEECCCCCHHHHHHHCCCCCCCEEEEEEEEECCCCCCCC PISGVSIPRVLMCKNYDDARRIKESAKDAEHIAIVGGGYIGVELAEAYSRNHKQVTLING CCCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEEEECCEEHHHHHHHHCCCCCEEEEECC VSPLLSHYVDLPLSHEISEALTTRGVELKANTVAKHFDSDDQHVFIQTDKGEIQADLAVV HHHHHHHHHCCCCCHHHHHHHHHCCCEEEEHHHHHHCCCCCCEEEEEECCCCEEEEEEEE CVGFRPMTELLIGQVDMNPDGSIHVNDYMQTSNPDIFAAGDAVAVHFNPTGKDAYAPLAT EECCCHHHHHHEEEECCCCCCCEEEECCEECCCCCEEEECCEEEEEECCCCCCCCCCHHH NAVRQGMMAGANLFKPTIKYMGTQATSALKLYDHNLGVTGLTLAHAKRNHLSAASVTMTD HHHHHHHHHCCHHHHHHHHHCCCCCHHEEEEEECCCCCCEEEEEHHHCCCCCEEEEEEEC DFRPPFMPDTVKITMVLVYDTDDRRILGAQFYSQYDIVNAANLISVMIQNRNTIDQLAYV CCCCCCCCCCEEEEEEEEEECCCCEEEHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHEE DMLFNPNYDKPWHYLNLLGQLAVTQADNTTA HEEECCCCCCCHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure MKVVVVGCTHAGTAAVRELLMKHPETEVDVFERREDISFLSCGIALYLEGTVGRLEDMFY CEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECEEEEEECCHHHHHHHHC ATPASLEALGPHVHVHLKHDVLSIDAADHRILAENLKTGNQQHYQYDKLVMATGSYPVVP CCCCCHHHCCCEEEEEEECCEEEECCCCCHHHHHHHCCCCCCCEEEEEEEEECCCCCCCC PISGVSIPRVLMCKNYDDARRIKESAKDAEHIAIVGGGYIGVELAEAYSRNHKQVTLING CCCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEEEECCEEHHHHHHHHCCCCCEEEEECC VSPLLSHYVDLPLSHEISEALTTRGVELKANTVAKHFDSDDQHVFIQTDKGEIQADLAVV HHHHHHHHHCCCCCHHHHHHHHHCCCEEEEHHHHHHCCCCCCEEEEEECCCCEEEEEEEE CVGFRPMTELLIGQVDMNPDGSIHVNDYMQTSNPDIFAAGDAVAVHFNPTGKDAYAPLAT EECCCHHHHHHEEEECCCCCCCEEEECCEECCCCCEEEECCEEEEEECCCCCCCCCCHHH NAVRQGMMAGANLFKPTIKYMGTQATSALKLYDHNLGVTGLTLAHAKRNHLSAASVTMTD HHHHHHHHHCCHHHHHHHHHCCCCCHHEEEEEECCCCCCEEEEEHHHCCCCCEEEEEEEC DFRPPFMPDTVKITMVLVYDTDDRRILGAQFYSQYDIVNAANLISVMIQNRNTIDQLAYV CCCCCCCCCCEEEEEEEEEECCCCEEEHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHEE DMLFNPNYDKPWHYLNLLGQLAVTQADNTTA HEEECCCCCCCHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1404382; 12663927; 2511195; 8262333 [H]