Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493732

Identifier: 116493732

GI number: 116493732

Start: 158768

End: 159847

Strand: Direct

Name: 116493732

Synonym: LSEI_0160

Alternate gene names: NA

Gene position: 158768-159847 (Clockwise)

Preceding gene: 116493731

Following gene: 116493733

Centisome position: 5.48

GC content: 45.83

Gene sequence:

>1080_bases
GTGAAAAAAACAATTTTCTGTATAGCAGCGTTTGTTGCCATGTTGATGACCCCTGCAGCCCATGTTTTTGCCTCAGAATT
GAACTTTGCGGCCAAGGCCCAGATGCCGGACAATCAGGTCAATAAAGGTGTTAGCTATTTTGACATCAAAATGGATCAGG
GTGCTAAGCAGGCCCTGCATGTTGACTTGCGAAACGATACAGAAAAAGAGGTGGCTGTGGATGTTGGCATTGCCAGTGCA
ACGACGAATATTAACGGCGTGGTTGAATACGGTCAAAATGCCATCAAGCCAGCGAAAAGCCTTGCCTTTAACATGAAGGA
TTATGTCAAAACGCCAGCTCAGGTCAAGATCCCTGCTAAAGGCAGCACGGTTTTAAATCTTGATGTGACCATGCCAAGCA
AACCACTCCATGGCGTGATGGCAGGCGGCATTACCTTGAAGGAACATCAGCCAGGCGATCAAGCTGCAAAAGATGCAGGT
AAAGGGGTTGCCATCAACAATCGCTTCTCGTACGTGATTGGCTTATTGATGCAACAAAGTACTGATCAGGTAGCGGCTCA
TGTGAAATTGAATGATGTTAAGCCGAGTCAGATCAATTACCGCAATGTGATCTTGGCATCCATGGAAAACGATGCCGCGA
CGTTCGTCAACAAAGTGGCGGTTGATGCCAAAATTATGGCTAAAGGTTCGGATAAATCTGTCTATCAAGTGGCTAAAGAA
GGCTTGCAAATGGCGCCGGACACGACCTTCGATTTTCCAATTGCGTTAGAAGGCAAGACGCTTAAGCCGGGTACGTATGT
TGCTCATCTTGAGGTGTATGGCAATCAGCAGGCAGATGGCGGGATGACTCGTAAAACAGCTGATGGCAAACAGCATTACC
ATGATCACTGGACGCTGACAAAGCAATTCACGATTACCGATAAAGTGGCCAAAAATCTGAATCAAAAAGATGTCTCGATT
AAAAAAGATAATAGCTGGCAATTGTATGCACTCATTGCTGTTGTCGCTGTACTGATCATGATTGTGGCGCTTCTACTCGT
CATTGTTTTCAAACGAAAGAAGAAGGAGCAAGCGTCCTGA

Upstream 100 bases:

>100_bases
GACGCAATTGGTTTCCGTTAGCGCACATACATTTTCTAGCATCTAGTTCCAACTTGAATAGACATGACCGATCACATCTT
AAAAGACAAGGAGATCCTTT

Downstream 100 bases:

>100_bases
TCAAGGATGAATAAGAATAATGGTACAATATTCGTAAGTATTCAGTGATTAAATTAGTCGATAAAACTAATGGACAGGGC
TGCGAATGAATCAATGGCAA

Product: cell surface protein

Products: NA

Alternate protein names: C-Terminal Membrane Anchored Cell Surface Protein; Cell Wall Surface Anchor Family Protein; Secreted Protein

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKKTIFCIAAFVAMLMTPAAHVFASELNFAAKAQMPDNQVNKGVSYFDIKMDQGAKQALHVDLRNDTEKEVAVDVGIASA
TTNINGVVEYGQNAIKPAKSLAFNMKDYVKTPAQVKIPAKGSTVLNLDVTMPSKPLHGVMAGGITLKEHQPGDQAAKDAG
KGVAINNRFSYVIGLLMQQSTDQVAAHVKLNDVKPSQINYRNVILASMENDAATFVNKVAVDAKIMAKGSDKSVYQVAKE
GLQMAPDTTFDFPIALEGKTLKPGTYVAHLEVYGNQQADGGMTRKTADGKQHYHDHWTLTKQFTITDKVAKNLNQKDVSI
KKDNSWQLYALIAVVAVLIMIVALLLVIVFKRKKKEQAS

Sequences:

>Translated_359_residues
MKKTIFCIAAFVAMLMTPAAHVFASELNFAAKAQMPDNQVNKGVSYFDIKMDQGAKQALHVDLRNDTEKEVAVDVGIASA
TTNINGVVEYGQNAIKPAKSLAFNMKDYVKTPAQVKIPAKGSTVLNLDVTMPSKPLHGVMAGGITLKEHQPGDQAAKDAG
KGVAINNRFSYVIGLLMQQSTDQVAAHVKLNDVKPSQINYRNVILASMENDAATFVNKVAVDAKIMAKGSDKSVYQVAKE
GLQMAPDTTFDFPIALEGKTLKPGTYVAHLEVYGNQQADGGMTRKTADGKQHYHDHWTLTKQFTITDKVAKNLNQKDVSI
KKDNSWQLYALIAVVAVLIMIVALLLVIVFKRKKKEQAS
>Mature_359_residues
MKKTIFCIAAFVAMLMTPAAHVFASELNFAAKAQMPDNQVNKGVSYFDIKMDQGAKQALHVDLRNDTEKEVAVDVGIASA
TTNINGVVEYGQNAIKPAKSLAFNMKDYVKTPAQVKIPAKGSTVLNLDVTMPSKPLHGVMAGGITLKEHQPGDQAAKDAG
KGVAINNRFSYVIGLLMQQSTDQVAAHVKLNDVKPSQINYRNVILASMENDAATFVNKVAVDAKIMAKGSDKSVYQVAKE
GLQMAPDTTFDFPIALEGKTLKPGTYVAHLEVYGNQQADGGMTRKTADGKQHYHDHWTLTKQFTITDKVAKNLNQKDVSI
KKDNSWQLYALIAVVAVLIMIVALLLVIVFKRKKKEQAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39107; Mature: 39107

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTIFCIAAFVAMLMTPAAHVFASELNFAAKAQMPDNQVNKGVSYFDIKMDQGAKQALH
CCCHHHHHHHHHHHHHCHHHHHHHHHCCCEEECCCCCHHHHCCCEEEEEEECCCCCEEEE
VDLRNDTEKEVAVDVGIASATTNINGVVEYGQNAIKPAKSLAFNMKDYVKTPAQVKIPAK
EECCCCCCCCEEEEEEEEECCCCCCHHHHCCCHHHCHHHHHHCCCHHHHCCCCEEEECCC
GSTVLNLDVTMPSKPLHGVMAGGITLKEHQPGDQAAKDAGKGVAINNRFSYVIGLLMQQS
CCEEEEEEEECCCCCCCHHEECCEEEECCCCCHHHHHHCCCCEEECCHHHHHHHHHHHCC
TDQVAAHVKLNDVKPSQINYRNVILASMENDAATFVNKVAVDAKIMAKGSDKSVYQVAKE
CCCEEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCEEEEECCCCHHHHHHHHH
GLQMAPDTTFDFPIALEGKTLKPGTYVAHLEVYGNQQADGGMTRKTADGKQHYHDHWTLT
HHHCCCCCCCCCEEEECCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHCCCEEEE
KQFTITDKVAKNLNQKDVSIKKDNSWQLYALIAVVAVLIMIVALLLVIVFKRKKKEQAS
EEEEEHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKTIFCIAAFVAMLMTPAAHVFASELNFAAKAQMPDNQVNKGVSYFDIKMDQGAKQALH
CCCHHHHHHHHHHHHHCHHHHHHHHHCCCEEECCCCCHHHHCCCEEEEEEECCCCCEEEE
VDLRNDTEKEVAVDVGIASATTNINGVVEYGQNAIKPAKSLAFNMKDYVKTPAQVKIPAK
EECCCCCCCCEEEEEEEEECCCCCCHHHHCCCHHHCHHHHHHCCCHHHHCCCCEEEECCC
GSTVLNLDVTMPSKPLHGVMAGGITLKEHQPGDQAAKDAGKGVAINNRFSYVIGLLMQQS
CCEEEEEEEECCCCCCCHHEECCEEEECCCCCHHHHHHCCCCEEECCHHHHHHHHHHHCC
TDQVAAHVKLNDVKPSQINYRNVILASMENDAATFVNKVAVDAKIMAKGSDKSVYQVAKE
CCCEEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCEEEEECCCCHHHHHHHHH
GLQMAPDTTFDFPIALEGKTLKPGTYVAHLEVYGNQQADGGMTRKTADGKQHYHDHWTLT
HHHCCCCCCCCCEEEECCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHCCCEEEE
KQFTITDKVAKNLNQKDVSIKKDNSWQLYALIAVVAVLIMIVALLLVIVFKRKKKEQAS
EEEEEHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA