Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493714

Identifier: 116493714

GI number: 116493714

Start: 143504

End: 143755

Strand: Direct

Name: 116493714

Synonym: LSEI_0142

Alternate gene names: NA

Gene position: 143504-143755 (Clockwise)

Preceding gene: 116493709

Following gene: 116493716

Centisome position: 4.96

GC content: 56.75

Gene sequence:

>252_bases
ATGTATACCATCCAAGCGACTGCCACGATTACTGGGCGCGGCACAGTGATCACGATTGCGCCTCCGGTTGAACGCATTCA
GCCGGGCGATCCGATCCGCCTTAATGGCACGACAACAGGTAAAGTCTGTGCGATTGAGAAGCGGCAACACCCGCACCATA
CTGACGAAGTCCCGTGTCTCGGGTTGCTCGTCACGGCACCTGTCAAAGTCGGGGATACAATTGAGTTTCCGCAGTCGCCA
CGGTGGTTGTGA

Upstream 100 bases:

>100_bases
GCTGGCAACCTGTTACGATCGAATAGAAGACCTATCAGGAAGTGTTGGTTAATTAAACTGTGCGATTTTTAACAAGACAC
AGTATCAGGGGGAAAGCGAT

Downstream 100 bases:

>100_bases
ACTGTAGGCGATACGCGCTCCCAGTTGCAGAAATCTGCTCGTACTCAAAGAAAAAGTCGCTATCTGAATCGTCAACGGCA
TCACGTTGATTTCAGATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MYTIQATATITGRGTVITIAPPVERIQPGDPIRLNGTTTGKVCAIEKRQHPHHTDEVPCLGLLVTAPVKVGDTIEFPQSP
RWL

Sequences:

>Translated_83_residues
MYTIQATATITGRGTVITIAPPVERIQPGDPIRLNGTTTGKVCAIEKRQHPHHTDEVPCLGLLVTAPVKVGDTIEFPQSP
RWL
>Mature_83_residues
MYTIQATATITGRGTVITIAPPVERIQPGDPIRLNGTTTGKVCAIEKRQHPHHTDEVPCLGLLVTAPVKVGDTIEFPQSP
RWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9012; Mature: 9012

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTIQATATITGRGTVITIAPPVERIQPGDPIRLNGTTTGKVCAIEKRQHPHHTDEVPCL
CEEEEEEEEECCCCEEEEECCCHHHCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCEE
GLLVTAPVKVGDTIEFPQSPRWL
EEEEECCEECCCEEECCCCCCCC
>Mature Secondary Structure
MYTIQATATITGRGTVITIAPPVERIQPGDPIRLNGTTTGKVCAIEKRQHPHHTDEVPCL
CEEEEEEEEECCCCEEEEECCCHHHCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCEE
GLLVTAPVKVGDTIEFPQSPRWL
EEEEECCEECCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA