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The map label for this gene is pepDA [H]

Identifier: 116493607

GI number: 116493607

Start: 33042

End: 34484

Strand: Direct

Name: pepDA [H]

Synonym: LSEI_0033

Alternate gene names: 116493607

Gene position: 33042-34484 (Clockwise)

Preceding gene: 116493604

Following gene: 116493608

Centisome position: 1.14

GC content: 49.27

Gene sequence:

>1443_bases
ATGGATCAGTTTGTGAATCACTTGAGTTGTACAGCGTTGCTTGTTGGTAAGAAGGCGTCGGTTGATGGATCGACGATGAT
TGCGCGAAATGAGGATGCTAGCGGTGGGATTAATCCGAAGCGTTTCATTGTTGTGCAGCCGGCTGATCAGCCGCAACGGT
ACGTATCGACATTCAATGGGTTTCAGTTGGATTTACCGCAAACACCGTTGCAGTATACTTGCACGCCGGTTGCTGATCAA
AGTCATGGGACTTGGGGTGAAGCTGGTATCAACAGCGAGAATGTGGCGATGAGTGCAACTGAAACTGAGTTCACAAACAC
CACAATGCTGGGATTGGACCCGCTTGAGCCGGACGGTATTGGTGAAGAGGCCATGTTGACGGTGGTATTGCCTTATATTC
ACAACGCTCGCGAAGGTGTCGAACGCCTGGGCGAGTTGGTCACCAAGTATGGTACCTGCGAAAGTAATGGGATCGCCTTT
TCTGATGCTAACGAAATCTGGTATTTTGAAACAGTTGGCGGCCATCACTGGGCGGCGGAACGGATTCCTGATGATCGTTA
TGTGCTGGCTCCGAATCAAACTGGTATTCAGGAGATTGATTTTCAGGCACCGGAACATTACAAGTACAGTGCTGATCTCA
AAGACTTTGCAGCTAAGTATCATTTGAATAAGGCAAAGGAAGGGTTCAATTTTCGAGACATTTTCGGTGAAGATACGCAG
GCCGATCATTATTACAATACGCCGCGGGTTTGGTATGCCCAGAAAATGCTGAATCCTGAAATTGATCAAGATCCTGAAAG
CCGAACGATGCCGTTTAGTCGTGTCCCGAGTCACTTGATTTCAGTCGAAGATGTAGCGATGGTATTGAGCAGTCATTACC
AAGCCACCGACTTTGATCCTTACGGCCAGACCGGCACGCCTGAGACGCGGCGGCGCTATCGTCCGATTGGCATGAATCGC
AATCAAGAAATGCATATTCTACAAATTCGGCCAAATATGCCGAAGAGTCATGCTGCCATTCACTGGCTTGCGGAAGGCGT
TAATATTTTCAACAGCCCGGTACCATTTTTCGCCAATTGCACAACGACACCGGAGAATTTCCAGTACACGCCGATTGATA
AAAGTTCAACCGATAGCTTCTATTGGCTCAACAAGCTAATCGCTATGGTGGCTGATCCGTTGTTTGCAGAACATGACTGG
GATGCCGAGTTCGCCGTATCTGAAAGTCGCAAGTTTGGTTTCGCTGCCGGCCGTGCCGCTGTGGCCAAAGGGGATGCGGC
TTTTGCCGATGTCAAACCAGAAGATCTGCCAGCGTGGCATGATGCGTTGAACGCCGAAACGGCAGCGACGATCACGAATG
ACCTACAATACCTCTTACACCAGCTGGTTTGCATCCGCGCGGAGAAAATGACACCAAGCTTTGAAAAAGGCGGGGAACTT
TAA

Upstream 100 bases:

>100_bases
ATGACCATCTAACTTACCACGTTCGCCTCTCCCTTTTACTTTTCAGCATCATTAGTACGAACCAGTGCTATCATAAAGTC
ATCTGAAAGGAAGCGTGGCT

Downstream 100 bases:

>100_bases
TCGGACTGCGAACTTAGCGCAGGTGCGACCGGTAAAAGAAGCAGTATGTCAAAAAAATAAACGCTCAGTCCTACTGACAG
ATTTTCATCAGCGGGGCTGG

Product: dipeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MDQFVNHLSCTALLVGKKASVDGSTMIARNEDASGGINPKRFIVVQPADQPQRYVSTFNGFQLDLPQTPLQYTCTPVADQ
SHGTWGEAGINSENVAMSATETEFTNTTMLGLDPLEPDGIGEEAMLTVVLPYIHNAREGVERLGELVTKYGTCESNGIAF
SDANEIWYFETVGGHHWAAERIPDDRYVLAPNQTGIQEIDFQAPEHYKYSADLKDFAAKYHLNKAKEGFNFRDIFGEDTQ
ADHYYNTPRVWYAQKMLNPEIDQDPESRTMPFSRVPSHLISVEDVAMVLSSHYQATDFDPYGQTGTPETRRRYRPIGMNR
NQEMHILQIRPNMPKSHAAIHWLAEGVNIFNSPVPFFANCTTTPENFQYTPIDKSSTDSFYWLNKLIAMVADPLFAEHDW
DAEFAVSESRKFGFAAGRAAVAKGDAAFADVKPEDLPAWHDALNAETAATITNDLQYLLHQLVCIRAEKMTPSFEKGGEL

Sequences:

>Translated_480_residues
MDQFVNHLSCTALLVGKKASVDGSTMIARNEDASGGINPKRFIVVQPADQPQRYVSTFNGFQLDLPQTPLQYTCTPVADQ
SHGTWGEAGINSENVAMSATETEFTNTTMLGLDPLEPDGIGEEAMLTVVLPYIHNAREGVERLGELVTKYGTCESNGIAF
SDANEIWYFETVGGHHWAAERIPDDRYVLAPNQTGIQEIDFQAPEHYKYSADLKDFAAKYHLNKAKEGFNFRDIFGEDTQ
ADHYYNTPRVWYAQKMLNPEIDQDPESRTMPFSRVPSHLISVEDVAMVLSSHYQATDFDPYGQTGTPETRRRYRPIGMNR
NQEMHILQIRPNMPKSHAAIHWLAEGVNIFNSPVPFFANCTTTPENFQYTPIDKSSTDSFYWLNKLIAMVADPLFAEHDW
DAEFAVSESRKFGFAAGRAAVAKGDAAFADVKPEDLPAWHDALNAETAATITNDLQYLLHQLVCIRAEKMTPSFEKGGEL
>Mature_480_residues
MDQFVNHLSCTALLVGKKASVDGSTMIARNEDASGGINPKRFIVVQPADQPQRYVSTFNGFQLDLPQTPLQYTCTPVADQ
SHGTWGEAGINSENVAMSATETEFTNTTMLGLDPLEPDGIGEEAMLTVVLPYIHNAREGVERLGELVTKYGTCESNGIAF
SDANEIWYFETVGGHHWAAERIPDDRYVLAPNQTGIQEIDFQAPEHYKYSADLKDFAAKYHLNKAKEGFNFRDIFGEDTQ
ADHYYNTPRVWYAQKMLNPEIDQDPESRTMPFSRVPSHLISVEDVAMVLSSHYQATDFDPYGQTGTPETRRRYRPIGMNR
NQEMHILQIRPNMPKSHAAIHWLAEGVNIFNSPVPFFANCTTTPENFQYTPIDKSSTDSFYWLNKLIAMVADPLFAEHDW
DAEFAVSESRKFGFAAGRAAVAKGDAAFADVKPEDLPAWHDALNAETAATITNDLQYLLHQLVCIRAEKMTPSFEKGGEL

Specific function: Unknown

COG id: COG4690

COG function: function code E; Dipeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C69 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005322 [H]

Pfam domain/function: PF03577 Peptidase_C69 [H]

EC number: NA

Molecular weight: Translated: 53768; Mature: 53768

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQFVNHLSCTALLVGKKASVDGSTMIARNEDASGGINPKRFIVVQPADQPQRYVSTFNG
CCHHHHHHHEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHCCC
FQLDLPQTPLQYTCTPVADQSHGTWGEAGINSENVAMSATETEFTNTTMLGLDPLEPDGI
EEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCC
GEEAMLTVVLPYIHNAREGVERLGELVTKYGTCESNGIAFSDANEIWYFETVGGHHWAAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCCHHH
RIPDDRYVLAPNQTGIQEIDFQAPEHYKYSADLKDFAAKYHLNKAKEGFNFRDIFGEDTQ
CCCCCCEEECCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCCC
ADHYYNTPRVWYAQKMLNPEIDQDPESRTMPFSRVPSHLISVEDVAMVLSSHYQATDFDP
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
YGQTGTPETRRRYRPIGMNRNQEMHILQIRPNMPKSHAAIHWLAEGVNIFNSPVPFFANC
CCCCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEC
TTTPENFQYTPIDKSSTDSFYWLNKLIAMVADPLFAEHDWDAEFAVSESRKFGFAAGRAA
CCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCEEECCCCCCCCCCCCHH
VAKGDAAFADVKPEDLPAWHDALNAETAATITNDLQYLLHQLVCIRAEKMTPSFEKGGEL
EECCCCEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCC
>Mature Secondary Structure
MDQFVNHLSCTALLVGKKASVDGSTMIARNEDASGGINPKRFIVVQPADQPQRYVSTFNG
CCHHHHHHHEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHCCC
FQLDLPQTPLQYTCTPVADQSHGTWGEAGINSENVAMSATETEFTNTTMLGLDPLEPDGI
EEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCC
GEEAMLTVVLPYIHNAREGVERLGELVTKYGTCESNGIAFSDANEIWYFETVGGHHWAAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCCHHH
RIPDDRYVLAPNQTGIQEIDFQAPEHYKYSADLKDFAAKYHLNKAKEGFNFRDIFGEDTQ
CCCCCCEEECCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCCC
ADHYYNTPRVWYAQKMLNPEIDQDPESRTMPFSRVPSHLISVEDVAMVLSSHYQATDFDP
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
YGQTGTPETRRRYRPIGMNRNQEMHILQIRPNMPKSHAAIHWLAEGVNIFNSPVPFFANC
CCCCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEC
TTTPENFQYTPIDKSSTDSFYWLNKLIAMVADPLFAEHDWDAEFAVSESRKFGFAAGRAA
CCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCEEECCCCCCCCCCCCHH
VAKGDAAFADVKPEDLPAWHDALNAETAATITNDLQYLLHQLVCIRAEKMTPSFEKGGEL
EECCCCEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]