| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116493590
Identifier: 116493590
GI number: 116493590
Start: 16311
End: 16526
Strand: Direct
Name: 116493590
Synonym: LSEI_0016
Alternate gene names: NA
Gene position: 16311-16526 (Clockwise)
Preceding gene: 116493589
Following gene: 116493592
Centisome position: 0.56
GC content: 46.76
Gene sequence:
>216_bases ATGAGTAAAACAAGGAAACTGAGTGAACTTGAGCTACAACAGTTTGTCGGCGGAAGTGATTCTAATAAATGCCTTATGGG ACTCGTTGGTGGCTGGGCTATTGGTGGTCTAAACGGAGCGGGATCTCTAAGTGGATTTGGCCCAGCAGGAGTTACGATTG GTGGTCTTTACGGGACACTCAGCGGCATTCTAACTGGTTATGCTACAAGTTGCTAA
Upstream 100 bases:
>100_bases TATATTAACAGTAATCCCTTTTTTCTGGATAATTGTTATCACAATAGAAATAACAGTCGCCCATTTTTCAGCGAAAGATC ATTTATGATGGAGGATTAAC
Downstream 100 bases:
>100_bases CTAATCTTAAAACACTTAGAATTCGTTTTTATTTTAAGATTGAGAATTATATGCAGACATCTTCTGAATAAACCGGTCTA TTTGTACTTTGCTCTCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MSKTRKLSELELQQFVGGSDSNKCLMGLVGGWAIGGLNGAGSLSGFGPAGVTIGGLYGTLSGILTGYATSC
Sequences:
>Translated_71_residues MSKTRKLSELELQQFVGGSDSNKCLMGLVGGWAIGGLNGAGSLSGFGPAGVTIGGLYGTLSGILTGYATSC >Mature_70_residues SKTRKLSELELQQFVGGSDSNKCLMGLVGGWAIGGLNGAGSLSGFGPAGVTIGGLYGTLSGILTGYATSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7014; Mature: 6883
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTRKLSELELQQFVGGSDSNKCLMGLVGGWAIGGLNGAGSLSGFGPAGVTIGGLYGTL CCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCEEEHHHHHHH SGILTGYATSC HHHHHHHCCCC >Mature Secondary Structure SKTRKLSELELQQFVGGSDSNKCLMGLVGGWAIGGLNGAGSLSGFGPAGVTIGGLYGTL CCCCCHHHHHHHHHCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCEEEHHHHHHH SGILTGYATSC HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA