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The map label for this gene is 116493481

Identifier: 116493481

GI number: 116493481

Start: 1727688

End: 1728140

Strand: Direct

Name: 116493481

Synonym: PEPE_1753

Alternate gene names: NA

Gene position: 1727688-1728140 (Clockwise)

Preceding gene: 116493480

Following gene: 116493492

Centisome position: 94.29

GC content: 35.54

Gene sequence:

>453_bases
ATGGACATTAATCTTGATTTTCCGTTAGGATCATCAATTATAAATTTGGTATTGAGTCATCGAAACCTCGCCACCAAAGA
AATACGCAAACTTGGACTTTATCCGGGGCAAGATTTAATCCTGGTAGAGCTATTGCGCAAAGATAACCGCTCACAAAATG
AGCTGGTTAAAGCGCTCTGTGTGGATCATTCAACGATTGCTAAATCTGTAAAAAGATTACTAAAAGCTGAAATAATTAAT
GCTCATAAATCTACTGAAGATAAGCGGGTAACCATAATTAGTTTGACCGTTAAAGGTAAGGCGTTAGCTATTCAGGCCGC
TAAGGTATGGAACGATGTGGAAAAAACCGCTTTTAAAGATTTTTCGCCAGCAGATATTAAAGAGTTTATGCAATATTCAC
AACATATAGCAAAAAATTTTACGGATAGAAGTTTAGAACTAAATGATAGATAA

Upstream 100 bases:

>100_bases
TTTTTATTGAAACTTAACTTAATTTGGTTGATAATATAGAAAGAAATTTAACAACATCACCATGTTTGTTTAAACACGGC
GCTGGTTATGGAGGAAAATA

Downstream 100 bases:

>100_bases
TTTTAATTGCATCTCTTTCTAGCTGATACCCAGAGTTCATCTTAAAAATAAAAGCAATCATTACCTCCGCATTTTTAAAA
TGTTGGAAACGATATGATTT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; MarR Family Transcriptional Regulator; MarR-Family Transcriptional Regulator; Transcriptional Regulator TrmB

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MDINLDFPLGSSIINLVLSHRNLATKEIRKLGLYPGQDLILVELLRKDNRSQNELVKALCVDHSTIAKSVKRLLKAEIIN
AHKSTEDKRVTIISLTVKGKALAIQAAKVWNDVEKTAFKDFSPADIKEFMQYSQHIAKNFTDRSLELNDR

Sequences:

>Translated_150_residues
MDINLDFPLGSSIINLVLSHRNLATKEIRKLGLYPGQDLILVELLRKDNRSQNELVKALCVDHSTIAKSVKRLLKAEIIN
AHKSTEDKRVTIISLTVKGKALAIQAAKVWNDVEKTAFKDFSPADIKEFMQYSQHIAKNFTDRSLELNDR
>Mature_150_residues
MDINLDFPLGSSIINLVLSHRNLATKEIRKLGLYPGQDLILVELLRKDNRSQNELVKALCVDHSTIAKSVKRLLKAEIIN
AHKSTEDKRVTIISLTVKGKALAIQAAKVWNDVEKTAFKDFSPADIKEFMQYSQHIAKNFTDRSLELNDR

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16999; Mature: 16999

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINLDFPLGSSIINLVLSHRNLATKEIRKLGLYPGQDLILVELLRKDNRSQNELVKALC
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
VDHSTIAKSVKRLLKAEIINAHKSTEDKRVTIISLTVKGKALAIQAAKVWNDVEKTAFKD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
FSPADIKEFMQYSQHIAKNFTDRSLELNDR
CCHHHHHHHHHHHHHHHHCCCCCCEECCCC
>Mature Secondary Structure
MDINLDFPLGSSIINLVLSHRNLATKEIRKLGLYPGQDLILVELLRKDNRSQNELVKALC
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
VDHSTIAKSVKRLLKAEIINAHKSTEDKRVTIISLTVKGKALAIQAAKVWNDVEKTAFKD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
FSPADIKEFMQYSQHIAKNFTDRSLELNDR
CCHHHHHHHHHHHHHHHHCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA