Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116493343

Identifier: 116493343

GI number: 116493343

Start: 1591775

End: 1593520

Strand: Reverse

Name: 116493343

Synonym: PEPE_1615

Alternate gene names: NA

Gene position: 1593520-1591775 (Counterclockwise)

Preceding gene: 116493344

Following gene: 116493341

Centisome position: 86.96

GC content: 31.21

Gene sequence:

>1746_bases
ATGGTTGCTCTAAATAAAAAAATTAAGACGCACTGGTATCTTATAATTATATTAGTCATAGGTATATTCATAACGATCCC
TCAGATACACCATCATATTACGATTATTGGTGCAGATGGATTATTTCATTTTAACCGGATATATGATACTGCTATGCAGA
TAAAAAATCATAATTTTTCCTACTTTATTCAATTATATGGGTTCTCTAACTCAGGTCGAATGGTCACATCAGTATATAGT
CCGTTAATCACATATATTTTTGGTGGAATATTGCTTATTTGCGGGAGTTTTTATAAATTTGAAATTGTAACGCGTTTTTT
ATTTTTTATTTTATCAGGGTTATCTATGAATTATGCCCTTAAAATGGGAAAGGTAAAAAATCAATTCATGATTCAATTGG
TTTGTATTATGTACGCATTTAGTCCAGCTGTAATTAGATGGGATGCGGCACAGAACTTTACCAGTATTGGTGCAATGCTT
ATTCCTTTGGTAGTCGGGTGCGGCATGCGGATGGTTAATAATAAAGATGAACCTATCAATTGGGTTCAACTAGGTACTAT
TATGGCAGTAGTGGTACAAACACACCTAGCAACTGCTATTCAATCAGTATTCTTGTTAGTTATCTATGCTATTATTGCCT
TAATAATTAATAGAGCTTCTAGAAAAAAATTACTTAAAAATGGTATTTACGCAGTTTTGCTTTGTATAAGCTTATCATTA
AATGTAGTAGCGGGAATGTTCGAATTATATAATGGTAACTATATAGTGCCTATCGTTAAGTTTGATTTTGTCGATGGCAA
GGGTATTTATAATATTTTACAAATATTTTCTGGAAAATGGGTTAACTTGTTTTTTATTTTAGCCGTTTCTTCAACTTTAT
TGTTCTTCTTTAAAAAGATATCTCTAGCTATGAAGGTTACAGGGTTTTTATCATTAACATTATTTTTGTGTTCAACAACT
ATTATTATTGATTGGCCTACTATCATGCATGATAGTGCTGTTTTTAGTAGTTTACTACAATTTCCAGCACGTTTAGTAGG
CCCAGCCACAGTGTTAGCATTAATTACAGTTGCCAGCATTGGTGATTTTGAGTGTACAAATTTCTTTATCAAACAAATTA
GGAATGGACTAATCCTAGTGTTGTTACTTTTCTTAGTAGTAAATATGCGCTCTAATTTTCGCTATAATCGGAGTGCAAGC
CACAATGTATTAGTTTCAAAATCGACTACTATACCATATATTGGACGTGATCCTAAAACTTTAAAACATATTACTTATTT
GATGAAGCAGCCTTTAAATGAACAGGATATTAATTATATTACTAAGTCAACTTCGGATTATATGCCTGCTAATCATAGCA
TAGATAATTCTGTATACTGGGATTATAACAATAAAATTATCCAACCGACCAAAAATAAAAATTATAAAAAGGAAGTAGCG
CAACATAAGATTATTGTGACATGGAAGGGCAATGGAACTTATGATAATCCACCAGTTGCATATTATAAAAATAATCATTT
TAAATTAAACGGCTTACCAGTAATCCCTAGATCTTCGGGAGGTATAATTAAGGTTCCTAAGGTTAAAGGAAAGATTGGTA
AAAATGTTATGGAAGTAACGTATACGCCTAAAAAAGTTAGTGTAATGATGCTGTGGATAGCTATGTTAAGCTGGATTTCA
ATAGTATTTTATGCTTTTATACGTCTATTCAGACAGGTAAAACGTTCATTTTTATTTAGTAATTAA

Upstream 100 bases:

>100_bases
TGAATTTAAAATATCATTTTACATTATGACGGATATTCTGGCATTGTTAATATCGTTGCGTGTATAAAAATATATTAAAG
GTTTAGTGGGGAGAAAATAT

Downstream 100 bases:

>100_bases
AAAGGCGTTGTAACAAGTGTTTTCTATACAAAATAGGAAAATATTCCTTAATATTAAGACAAAAAAATAAGCTGTTATCA
AAGATTTTATTTCCTTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 581; Mature: 581

Protein sequence:

>581_residues
MVALNKKIKTHWYLIIILVIGIFITIPQIHHHITIIGADGLFHFNRIYDTAMQIKNHNFSYFIQLYGFSNSGRMVTSVYS
PLITYIFGGILLICGSFYKFEIVTRFLFFILSGLSMNYALKMGKVKNQFMIQLVCIMYAFSPAVIRWDAAQNFTSIGAML
IPLVVGCGMRMVNNKDEPINWVQLGTIMAVVVQTHLATAIQSVFLLVIYAIIALIINRASRKKLLKNGIYAVLLCISLSL
NVVAGMFELYNGNYIVPIVKFDFVDGKGIYNILQIFSGKWVNLFFILAVSSTLLFFFKKISLAMKVTGFLSLTLFLCSTT
IIIDWPTIMHDSAVFSSLLQFPARLVGPATVLALITVASIGDFECTNFFIKQIRNGLILVLLLFLVVNMRSNFRYNRSAS
HNVLVSKSTTIPYIGRDPKTLKHITYLMKQPLNEQDINYITKSTSDYMPANHSIDNSVYWDYNNKIIQPTKNKNYKKEVA
QHKIIVTWKGNGTYDNPPVAYYKNNHFKLNGLPVIPRSSGGIIKVPKVKGKIGKNVMEVTYTPKKVSVMMLWIAMLSWIS
IVFYAFIRLFRQVKRSFLFSN

Sequences:

>Translated_581_residues
MVALNKKIKTHWYLIIILVIGIFITIPQIHHHITIIGADGLFHFNRIYDTAMQIKNHNFSYFIQLYGFSNSGRMVTSVYS
PLITYIFGGILLICGSFYKFEIVTRFLFFILSGLSMNYALKMGKVKNQFMIQLVCIMYAFSPAVIRWDAAQNFTSIGAML
IPLVVGCGMRMVNNKDEPINWVQLGTIMAVVVQTHLATAIQSVFLLVIYAIIALIINRASRKKLLKNGIYAVLLCISLSL
NVVAGMFELYNGNYIVPIVKFDFVDGKGIYNILQIFSGKWVNLFFILAVSSTLLFFFKKISLAMKVTGFLSLTLFLCSTT
IIIDWPTIMHDSAVFSSLLQFPARLVGPATVLALITVASIGDFECTNFFIKQIRNGLILVLLLFLVVNMRSNFRYNRSAS
HNVLVSKSTTIPYIGRDPKTLKHITYLMKQPLNEQDINYITKSTSDYMPANHSIDNSVYWDYNNKIIQPTKNKNYKKEVA
QHKIIVTWKGNGTYDNPPVAYYKNNHFKLNGLPVIPRSSGGIIKVPKVKGKIGKNVMEVTYTPKKVSVMMLWIAMLSWIS
IVFYAFIRLFRQVKRSFLFSN
>Mature_581_residues
MVALNKKIKTHWYLIIILVIGIFITIPQIHHHITIIGADGLFHFNRIYDTAMQIKNHNFSYFIQLYGFSNSGRMVTSVYS
PLITYIFGGILLICGSFYKFEIVTRFLFFILSGLSMNYALKMGKVKNQFMIQLVCIMYAFSPAVIRWDAAQNFTSIGAML
IPLVVGCGMRMVNNKDEPINWVQLGTIMAVVVQTHLATAIQSVFLLVIYAIIALIINRASRKKLLKNGIYAVLLCISLSL
NVVAGMFELYNGNYIVPIVKFDFVDGKGIYNILQIFSGKWVNLFFILAVSSTLLFFFKKISLAMKVTGFLSLTLFLCSTT
IIIDWPTIMHDSAVFSSLLQFPARLVGPATVLALITVASIGDFECTNFFIKQIRNGLILVLLLFLVVNMRSNFRYNRSAS
HNVLVSKSTTIPYIGRDPKTLKHITYLMKQPLNEQDINYITKSTSDYMPANHSIDNSVYWDYNNKIIQPTKNKNYKKEVA
QHKIIVTWKGNGTYDNPPVAYYKNNHFKLNGLPVIPRSSGGIIKVPKVKGKIGKNVMEVTYTPKKVSVMMLWIAMLSWIS
IVFYAFIRLFRQVKRSFLFSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66074; Mature: 66074

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALNKKIKTHWYLIIILVIGIFITIPQIHHHITIIGADGLFHFNRIYDTAMQIKNHNFS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCHHHHHHHHHHHHHHCCCCEE
YFIQLYGFSNSGRMVTSVYSPLITYIFGGILLICGSFYKFEIVTRFLFFILSGLSMNYAL
EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHE
KMGKVKNQFMIQLVCIMYAFSPAVIRWDAAQNFTSIGAMLIPLVVGCGMRMVNNKDEPIN
EHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCH
WVQLGTIMAVVVQTHLATAIQSVFLLVIYAIIALIINRASRKKLLKNGIYAVLLCISLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHH
NVVAGMFELYNGNYIVPIVKFDFVDGKGIYNILQIFSGKWVNLFFILAVSSTLLFFFKKI
HHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SLAMKVTGFLSLTLFLCSTTIIIDWPTIMHDSAVFSSLLQFPARLVGPATVLALITVASI
HHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
GDFECTNFFIKQIRNGLILVLLLFLVVNMRSNFRYNRSASHNVLVSKSTTIPYIGRDPKT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHH
LKHITYLMKQPLNEQDINYITKSTSDYMPANHSIDNSVYWDYNNKIIQPTKNKNYKKEVA
HHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCHHHHHH
QHKIIVTWKGNGTYDNPPVAYYKNNHFKLNGLPVIPRSSGGIIKVPKVKGKIGKNVMEVT
CCEEEEEECCCCCCCCCCEEEEECCEEEECCEEEEECCCCCEEECCCCCCCCCCCEEEEE
YTPKKVSVMMLWIAMLSWISIVFYAFIRLFRQVKRSFLFSN
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVALNKKIKTHWYLIIILVIGIFITIPQIHHHITIIGADGLFHFNRIYDTAMQIKNHNFS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCHHHHHHHHHHHHHHCCCCEE
YFIQLYGFSNSGRMVTSVYSPLITYIFGGILLICGSFYKFEIVTRFLFFILSGLSMNYAL
EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHE
KMGKVKNQFMIQLVCIMYAFSPAVIRWDAAQNFTSIGAMLIPLVVGCGMRMVNNKDEPIN
EHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCH
WVQLGTIMAVVVQTHLATAIQSVFLLVIYAIIALIINRASRKKLLKNGIYAVLLCISLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHH
NVVAGMFELYNGNYIVPIVKFDFVDGKGIYNILQIFSGKWVNLFFILAVSSTLLFFFKKI
HHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SLAMKVTGFLSLTLFLCSTTIIIDWPTIMHDSAVFSSLLQFPARLVGPATVLALITVASI
HHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
GDFECTNFFIKQIRNGLILVLLLFLVVNMRSNFRYNRSASHNVLVSKSTTIPYIGRDPKT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHH
LKHITYLMKQPLNEQDINYITKSTSDYMPANHSIDNSVYWDYNNKIIQPTKNKNYKKEVA
HHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCHHHHHH
QHKIIVTWKGNGTYDNPPVAYYKNNHFKLNGLPVIPRSSGGIIKVPKVKGKIGKNVMEVT
CCEEEEEECCCCCCCCCCEEEEECCEEEECCEEEEECCCCCEEECCCCCCCCCCCEEEEE
YTPKKVSVMMLWIAMLSWISIVFYAFIRLFRQVKRSFLFSN
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA