| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493310
Identifier: 116493310
GI number: 116493310
Start: 1550314
End: 1550565
Strand: Direct
Name: 116493310
Synonym: PEPE_1582
Alternate gene names: NA
Gene position: 1550314-1550565 (Clockwise)
Preceding gene: 116493305
Following gene: 116493313
Centisome position: 84.61
GC content: 29.37
Gene sequence:
>252_bases ATGATTATTAACGATAAAAAAATGGACCAGTACCTTGAAGTTCAATTAATTGGCCATAAAGATAACAAAATCAAAGCCAA AACCAGCGCTGGACAATACATATTTGTTTATCCTACCACCGAACAAACTAACGATCCTTTATTTTGGAAAAGTTTAAAAG ATATTATTAATAATAAAATGTGGCTTCCAATTACTAAACAATTTCATCAATTGATAGCTAGTGATTGGCTTGTACCAAGT ATTCAAATTTAA
Upstream 100 bases:
>100_bases CAAACGTGATTTTTATTAAGATGCACTTAATTATTGGTATATTTTATAATTCCTTAACCTTTCCATGGTATTCTGAAAAA GTAAAGAAAGGTGATGCTTG
Downstream 100 bases:
>100_bases TCCGATATTAAACCAAGAAGCTGTGACAAATGCTAGGATTTAATCCCCTTCATTTGATTCACAGCTTCTTTTTATTTAAC AATCTCTAATAAATCAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MIINDKKMDQYLEVQLIGHKDNKIKAKTSAGQYIFVYPTTEQTNDPLFWKSLKDIINNKMWLPITKQFHQLIASDWLVPS IQI
Sequences:
>Translated_83_residues MIINDKKMDQYLEVQLIGHKDNKIKAKTSAGQYIFVYPTTEQTNDPLFWKSLKDIINNKMWLPITKQFHQLIASDWLVPS IQI >Mature_83_residues MIINDKKMDQYLEVQLIGHKDNKIKAKTSAGQYIFVYPTTEQTNDPLFWKSLKDIINNKMWLPITKQFHQLIASDWLVPS IQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9778; Mature: 9778
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIINDKKMDQYLEVQLIGHKDNKIKAKTSAGQYIFVYPTTEQTNDPLFWKSLKDIINNKM CCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCE WLPITKQFHQLIASDWLVPSIQI EECHHHHHHHHHHCCCCCCEECC >Mature Secondary Structure MIINDKKMDQYLEVQLIGHKDNKIKAKTSAGQYIFVYPTTEQTNDPLFWKSLKDIINNKM CCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCE WLPITKQFHQLIASDWLVPSIQI EECHHHHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA