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The map label for this gene is nusG [H]

Identifier: 116493232

GI number: 116493232

Start: 1463534

End: 1464079

Strand: Reverse

Name: nusG [H]

Synonym: PEPE_1494

Alternate gene names: 116493232

Gene position: 1464079-1463534 (Counterclockwise)

Preceding gene: 116493233

Following gene: 116493231

Centisome position: 79.9

GC content: 36.45

Gene sequence:

>546_bases
TTGGAAACTGAAGAAAAAAACTGGTATGTGTTACATACATATTCTGGATATGAAAATAAAGTTAAAAATAACTTGGATTC
ACGTGCTAAATCAATGGGGATGGCGGAATATATTTTCCGAGTAGTTGTTCCCGAAGAAGAAGAAGTTGAAACTAAAAATG
GGGAAGACAAGATTGTTAAGAAGAATGAATTCCCTGGCTATGTTTTGGTTGAAATGATTATGACTGATGATTCTTGGTAC
GTGGTTCGTAATACACCAGGAGTTACTGGATTTATTGGTTCCCATGGTTCTGGTAGTAAACCAACTCCACTTTTACCAGA
TGAAGTTGAACGTATTCTTCGTCGCTTAGGAATGACTGCTCGTCATGCTGATATCGAAGTTGAAGTAGGCGAATTAGTTA
AGATCGTCGATGGCGCTTTTGAAGGTTTGACTGGTAAGATTACTGAAGTCGATAATAATAACATGAAGGTTAAAGTTAAC
ATCGATATGTTCGGTCGAGAAACTAGTACAGAACTAGATATCGAACAAATTGATAAAATTGACTAG

Upstream 100 bases:

>100_bases
GTATAATGGCATAAGGTCGATTATTTTGTTATAATTTAATTTGTTGATTAGAAACTTCGTGCTTACGGAGTTTTTTTATT
TTGGAAAAGGAGCGCTTAAC

Downstream 100 bases:

>100_bases
ATTTTAATTTGAACAAACATTTCGGGTGTGGTATTATATCGTAGTATGCCTTGCATACTCAATGTGGGAGAAGAAATATA
AATCTTCATCGTGACCACAC

Product: transcription antitermination protein nusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
METEEKNWYVLHTYSGYENKVKNNLDSRAKSMGMAEYIFRVVVPEEEEVETKNGEDKIVKKNEFPGYVLVEMIMTDDSWY
VVRNTPGVTGFIGSHGSGSKPTPLLPDEVERILRRLGMTARHADIEVEVGELVKIVDGAFEGLTGKITEVDNNNMKVKVN
IDMFGRETSTELDIEQIDKID

Sequences:

>Translated_181_residues
METEEKNWYVLHTYSGYENKVKNNLDSRAKSMGMAEYIFRVVVPEEEEVETKNGEDKIVKKNEFPGYVLVEMIMTDDSWY
VVRNTPGVTGFIGSHGSGSKPTPLLPDEVERILRRLGMTARHADIEVEVGELVKIVDGAFEGLTGKITEVDNNNMKVKVN
IDMFGRETSTELDIEQIDKID
>Mature_181_residues
METEEKNWYVLHTYSGYENKVKNNLDSRAKSMGMAEYIFRVVVPEEEEVETKNGEDKIVKKNEFPGYVLVEMIMTDDSWY
VVRNTPGVTGFIGSHGSGSKPTPLLPDEVERILRRLGMTARHADIEVEVGELVKIVDGAFEGLTGKITEVDNNNMKVKVN
IDMFGRETSTELDIEQIDKID

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=181, Percent_Identity=39.7790055248619, Blast_Score=138, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20520; Mature: 20520

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METEEKNWYVLHTYSGYENKVKNNLDSRAKSMGMAEYIFRVVVPEEEEVETKNGEDKIVK
CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHEEECCCHHHHCCCCCCCCEEE
KNEFPGYVLVEMIMTDDSWYVVRNTPGVTGFIGSHGSGSKPTPLLPDEVERILRRLGMTA
CCCCCCEEEEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCC
RHADIEVEVGELVKIVDGAFEGLTGKITEVDNNNMKVKVNIDMFGRETSTELDIEQIDKI
CCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCHHHHCCC
D
C
>Mature Secondary Structure
METEEKNWYVLHTYSGYENKVKNNLDSRAKSMGMAEYIFRVVVPEEEEVETKNGEDKIVK
CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHEEECCCHHHHCCCCCCCCEEE
KNEFPGYVLVEMIMTDDSWYVVRNTPGVTGFIGSHGSGSKPTPLLPDEVERILRRLGMTA
CCCCCCEEEEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCC
RHADIEVEVGELVKIVDGAFEGLTGKITEVDNNNMKVKVNIDMFGRETSTELDIEQIDKI
CCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCHHHHCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7968510; 9384377 [H]