Click here to switch to the map view.

The map label for this gene is yaaQ [H]

Identifier: 116493218

GI number: 116493218

Start: 1452098

End: 1452433

Strand: Reverse

Name: yaaQ [H]

Synonym: PEPE_1480

Alternate gene names: 116493218

Gene position: 1452433-1452098 (Counterclockwise)

Preceding gene: 116493219

Following gene: 116493217

Centisome position: 79.26

GC content: 38.69

Gene sequence:

>336_bases
ATGGCAACTAAGTTAGTTATCGCAATTGTACAAGATAAAGATGCAAACTATTTGAGTGATCAGTTTATTGATCAAAATGT
TCGAGCAACTAAGTTATCCACAACTGGTGGTTTTCTACAATCAGGTAATACAACTTTCATGATTGGGATTGAAGAAGAAC
GTGTCCCAGAAGTCCTTGAAATTATCAAGAAAGCTAGTCATACCAGAGAAGAATTTATGACACCATCTGTTAACATGGAC
GTTAATATGGAAGGTACTACGGCCTATCCAATTAAGGTTCAAGTCGGTGGTGCAACCGTCCTTGTTCTTCCGGTAGATCA
ATTCGAGCGCTTCTAG

Upstream 100 bases:

>100_bases
TCGGATTGTCGTAATTGATGCGAGTCAAGAACTTGATGATGTAAAGAGAGATGTAATTGAAGTGTTAGACCAAATTTTAA
ATTAGCGGAGGAATATTATT

Downstream 100 bases:

>100_bases
TGGAAGATCTGAAAAATTTAACTAATCAGGCTGTGGAAAAACAACCTGAAATTGTTAAACGCTTTAATGAAATGATTGAT
AGCCAGCATTTGTCGCATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MATKLVIAIVQDKDANYLSDQFIDQNVRATKLSTTGGFLQSGNTTFMIGIEEERVPEVLEIIKKASHTREEFMTPSVNMD
VNMEGTTAYPIKVQVGGATVLVLPVDQFERF

Sequences:

>Translated_111_residues
MATKLVIAIVQDKDANYLSDQFIDQNVRATKLSTTGGFLQSGNTTFMIGIEEERVPEVLEIIKKASHTREEFMTPSVNMD
VNMEGTTAYPIKVQVGGATVLVLPVDQFERF
>Mature_110_residues
ATKLVIAIVQDKDANYLSDQFIDQNVRATKLSTTGGFLQSGNTTFMIGIEEERVPEVLEIIKKASHTREEFMTPSVNMDV
NMEGTTAYPIKVQVGGATVLVLPVDQFERF

Specific function: Unknown

COG id: COG3870

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010375
- InterPro:   IPR011322 [H]

Pfam domain/function: PF06153 DUF970 [H]

EC number: NA

Molecular weight: Translated: 12326; Mature: 12195

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKLVIAIVQDKDANYLSDQFIDQNVRATKLSTTGGFLQSGNTTFMIGIEEERVPEVLE
CCCEEEEEEEECCCCCCCCHHHHCCCCEEEEEECCCCEEECCCEEEEEEECHHCHHHHHH
IIKKASHTREEFMTPSVNMDVNMEGTTAYPIKVQVGGATVLVLPVDQFERF
HHHHCCCCHHHHCCCCCCEEEECCCCEEEEEEEEECCEEEEEEEHHHHCCC
>Mature Secondary Structure 
ATKLVIAIVQDKDANYLSDQFIDQNVRATKLSTTGGFLQSGNTTFMIGIEEERVPEVLE
CCEEEEEEEECCCCCCCCHHHHCCCCEEEEEECCCCEEECCCEEEEEEECHHCHHHHHH
IIKKASHTREEFMTPSVNMDVNMEGTTAYPIKVQVGGATVLVLPVDQFERF
HHHHCCCCHHHHCCCCCCEEEECCCCEEEEEEEEECCEEEEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]