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The map label for this gene is rex

Identifier: 116493208

GI number: 116493208

Start: 1443943

End: 1444569

Strand: Reverse

Name: rex

Synonym: PEPE_1470

Alternate gene names: 116493208

Gene position: 1444569-1443943 (Counterclockwise)

Preceding gene: 116493209

Following gene: 116493206

Centisome position: 78.84

GC content: 36.52

Gene sequence:

>627_bases
ATGGATGATAATAAAATCTCATTGGCAACAACTCGTCGTTTACCATTATACTACCGTTGCTTGAGTGAACTAAATGAAAA
AGGCGAAGATAAAGTCTCTTCAGCCGTTTTGGAACGGTTATTAAAAATCGACGCTGCAACCGTACGTCGTGATTTTTCTT
ATTTTGGTCAAATGGGGCGACGTGGATATGGATATGATGTGAAGATTTTATTGGAATTATTTAACGACGTTTTAAAACAA
GATACAGCTGCTAATGTTGCCATTGTTGGTGTAGGTAATTTGGGGCATGCGTTAATTAACTTCAAGTTTCATAAGACGGG
CAATGCTCGGATTAAAATGGCATTTGACGTTAATCCTGAGGTAGTAGGTACGATTCAAAGCGAAGTTCCGGTCTATGATA
TTAATGAAATCAAGCAACGTGTTAGAGATGAGAAGATTGAAGTAGCCATTTTAACAGTGCCTAATTCACAAGCACAACGG
GTTACCGATTTACTTGTAGAAGCAGGCATCAAAGGAATTATGAATTTCACCACTGAAATTATTGATGTACCTTATAATGT
AACTATCCATGATGTTGATTTATCTCTAGAATTACAAGCCTTGATTTACTCAATGGATCAAGATTAA

Upstream 100 bases:

>100_bases
GTATGGTCGTTCTTCATAACTTTGTGGAAAATAATCAAGTTCATGCCAAAATGTTAACAGGATTATTAAAGGTAATTCAG
TAGAAAAGGTGGAAGAAAAA

Downstream 100 bases:

>100_bases
AAAATACAAAAAGCTATGACTCAATTTCTAAACGACGGATAAGTCGCTTATTAAGTCATAGCTTTTTTATTTTAGTTTAT
AAAATATGAATTTGATTTTC

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MDDNKISLATTRRLPLYYRCLSELNEKGEDKVSSAVLERLLKIDAATVRRDFSYFGQMGRRGYGYDVKILLELFNDVLKQ
DTAANVAIVGVGNLGHALINFKFHKTGNARIKMAFDVNPEVVGTIQSEVPVYDINEIKQRVRDEKIEVAILTVPNSQAQR
VTDLLVEAGIKGIMNFTTEIIDVPYNVTIHDVDLSLELQALIYSMDQD

Sequences:

>Translated_208_residues
MDDNKISLATTRRLPLYYRCLSELNEKGEDKVSSAVLERLLKIDAATVRRDFSYFGQMGRRGYGYDVKILLELFNDVLKQ
DTAANVAIVGVGNLGHALINFKFHKTGNARIKMAFDVNPEVVGTIQSEVPVYDINEIKQRVRDEKIEVAILTVPNSQAQR
VTDLLVEAGIKGIMNFTTEIIDVPYNVTIHDVDLSLELQALIYSMDQD
>Mature_208_residues
MDDNKISLATTRRLPLYYRCLSELNEKGEDKVSSAVLERLLKIDAATVRRDFSYFGQMGRRGYGYDVKILLELFNDVLKQ
DTAANVAIVGVGNLGHALINFKFHKTGNARIKMAFDVNPEVVGTIQSEVPVYDINEIKQRVRDEKIEVAILTVPNSQAQR
VTDLLVEAGIKGIMNFTTEIIDVPYNVTIHDVDLSLELQALIYSMDQD

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): REX_PEDPA (Q03E71)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_804943.1
- ProteinModelPortal:   Q03E71
- SMR:   Q03E71
- STRING:   Q03E71
- GeneID:   4417321
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_1470
- NMPDR:   fig|278197.10.peg.1294
- eggNOG:   COG2344
- HOGENOM:   HBG482264
- OMA:   TRGVGYD
- ProtClustDB:   PRK05472
- BioCyc:   PPEN278197:PEPE_1470-MONOMER
- GO:   GO:0005737
- GO:   GO:0006350
- HAMAP:   MF_01131
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991
- Gene3D:   G3DSA:3.40.50.720
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00881

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N

EC number: NA

Molecular weight: Translated: 23409; Mature: 23409

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDNKISLATTRRLPLYYRCLSELNEKGEDKVSSAVLERLLKIDAATVRRDFSYFGQMGR
CCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RGYGYDVKILLELFNDVLKQDTAANVAIVGVGNLGHALINFKFHKTGNARIKMAFDVNPE
CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCC
VVGTIQSEVPVYDINEIKQRVRDEKIEVAILTVPNSQAQRVTDLLVEAGIKGIMNFTTEI
EEEEECCCCCEECHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
IDVPYNVTIHDVDLSLELQALIYSMDQD
HCCCCEEEEEEECCCEEHHHHHHHCCCC
>Mature Secondary Structure
MDDNKISLATTRRLPLYYRCLSELNEKGEDKVSSAVLERLLKIDAATVRRDFSYFGQMGR
CCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RGYGYDVKILLELFNDVLKQDTAANVAIVGVGNLGHALINFKFHKTGNARIKMAFDVNPE
CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCC
VVGTIQSEVPVYDINEIKQRVRDEKIEVAILTVPNSQAQRVTDLLVEAGIKGIMNFTTEI
EEEEECCCCCEECHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
IDVPYNVTIHDVDLSLELQALIYSMDQD
HCCCCEEEEEEECCCEEHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA