Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116493194

Identifier: 116493194

GI number: 116493194

Start: 1429428

End: 1429781

Strand: Reverse

Name: 116493194

Synonym: PEPE_1456

Alternate gene names: NA

Gene position: 1429781-1429428 (Counterclockwise)

Preceding gene: 116493195

Following gene: 116493192

Centisome position: 78.03

GC content: 33.05

Gene sequence:

>354_bases
ATGGTTGTTCAACATGATGAAATCAAAAAATTATTAAAGGGTAATAACTTAGATAGCACTAACGAATGGATTGTCTATGG
TACCAAAGGTGAAAGGGGATATTGGATTGCGTTGAGTGATCGGGGGGTTACCCTGTTACCTGTTGCTCAGCAAGGAAATC
TAACCGGGGAAATTATCCCCTTCGATAATCAAAAAATTAAAAGTATTGCCTTAAAAAAGAGCATTCTATCGGATAAGCTC
ATAATTGTGGATACTAAAAATAAAAAACATGTTCTAAAAGTAGCTACTCGCCATCTGGGAAATAAACATCATCATGGAGA
CTTTTTAAAAATTATTGAAAAATATAAAAAATAA

Upstream 100 bases:

>100_bases
ATGTAAGATATCCAAATAATGTATGAACTTAGAGTACCCAGTAATATTCAGCTTTTAAAAAAGAAGAAATAAATTTAATG
TTTTGGGAGAAGTTATAAAA

Downstream 100 bases:

>100_bases
AAAAACGATTTTAAGTGTCGATGAGGACATTAACTGTTATCTTAGAATTTTTGTCTCAATTCGGAAGATATCATAGTTAC
TTAAAATCGTTTTTTTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MVVQHDEIKKLLKGNNLDSTNEWIVYGTKGERGYWIALSDRGVTLLPVAQQGNLTGEIIPFDNQKIKSIALKKSILSDKL
IIVDTKNKKHVLKVATRHLGNKHHHGDFLKIIEKYKK

Sequences:

>Translated_117_residues
MVVQHDEIKKLLKGNNLDSTNEWIVYGTKGERGYWIALSDRGVTLLPVAQQGNLTGEIIPFDNQKIKSIALKKSILSDKL
IIVDTKNKKHVLKVATRHLGNKHHHGDFLKIIEKYKK
>Mature_117_residues
MVVQHDEIKKLLKGNNLDSTNEWIVYGTKGERGYWIALSDRGVTLLPVAQQGNLTGEIIPFDNQKIKSIALKKSILSDKL
IIVDTKNKKHVLKVATRHLGNKHHHGDFLKIIEKYKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13323; Mature: 13323

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVQHDEIKKLLKGNNLDSTNEWIVYGTKGERGYWIALSDRGVTLLPVAQQGNLTGEIIP
CCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEEEE
FDNQKIKSIALKKSILSDKLIIVDTKNKKHVLKVATRHLGNKHHHGDFLKIIEKYKK
CCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MVVQHDEIKKLLKGNNLDSTNEWIVYGTKGERGYWIALSDRGVTLLPVAQQGNLTGEIIP
CCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEEEE
FDNQKIKSIALKKSILSDKLIIVDTKNKKHVLKVATRHLGNKHHHGDFLKIIEKYKK
CCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA