Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116493189

Identifier: 116493189

GI number: 116493189

Start: 1424716

End: 1425270

Strand: Direct

Name: 116493189

Synonym: PEPE_1451

Alternate gene names: NA

Gene position: 1424716-1425270 (Clockwise)

Preceding gene: 116493179

Following gene: 116493190

Centisome position: 77.75

GC content: 40.54

Gene sequence:

>555_bases
ATGAAGAATTTTTTTAGTATCAAAAATGTTTTTTCTGTGCGAAATCTAACCATTATGGCTTTGTTGGCAGCATTGGATGT
TGTGTTAGCGCGTTATACCACCATCCATTTGACGCCTCAATTTACCTTGGTTAGTTTCGAATATATACCAGCAGCCGTTG
TGTCTGCGCTATTTGGACCTTGGGCAGGAATTGTCTTTGGATTAGTTAGTGATACCGTGGGGTATTTTTCTAATCCGGTG
GGACCTTACTTACCCATTTGGGCCATCAGTGCTATGGTTGCTAATTTAATCCAATCGATATTCCTATACCCAGGTAAATT
CGACTGGTGGCGGATTATTGTGGCACGCCTCTTAGTGATGCTAATTGTCACGATGGGCTTAAATTTCATTTGGCAATCCA
TTTACTTTGGTGCAGCAGCGGCCGTTTATTACAACTCAGCTCGCATCATTAGTAATATTATTCAATTGCCAATCCAAGTA
ATTTTAATTCGTATTTTTGGTAAAATTGCAATGCGAACGGTCCAGCGACTCAATGCGAACCGCCAATCCATTTAA

Upstream 100 bases:

>100_bases
TGTCAGCGATATCGATTCCGCATCTCGCCGTTGAATTGGGAAGTTTTTCATGCTATTTCCTTTTCGTTGAAACGGCCAAC
TAAAGACTGGAGGGATTTGC

Downstream 100 bases:

>100_bases
TAAATTTATTTGCTTTTATCTACCATTCATCATAGAATAGTAATTGATTATTTTTTTCTGAGGAGGATCACCATGAAGTC
ACCATACAATTCATTTGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKNFFSIKNVFSVRNLTIMALLAALDVVLARYTTIHLTPQFTLVSFEYIPAAVVSALFGPWAGIVFGLVSDTVGYFSNPV
GPYLPIWAISAMVANLIQSIFLYPGKFDWWRIIVARLLVMLIVTMGLNFIWQSIYFGAAAAVYYNSARIISNIIQLPIQV
ILIRIFGKIAMRTVQRLNANRQSI

Sequences:

>Translated_184_residues
MKNFFSIKNVFSVRNLTIMALLAALDVVLARYTTIHLTPQFTLVSFEYIPAAVVSALFGPWAGIVFGLVSDTVGYFSNPV
GPYLPIWAISAMVANLIQSIFLYPGKFDWWRIIVARLLVMLIVTMGLNFIWQSIYFGAAAAVYYNSARIISNIIQLPIQV
ILIRIFGKIAMRTVQRLNANRQSI
>Mature_184_residues
MKNFFSIKNVFSVRNLTIMALLAALDVVLARYTTIHLTPQFTLVSFEYIPAAVVSALFGPWAGIVFGLVSDTVGYFSNPV
GPYLPIWAISAMVANLIQSIFLYPGKFDWWRIIVARLLVMLIVTMGLNFIWQSIYFGAAAAVYYNSARIISNIIQLPIQV
ILIRIFGKIAMRTVQRLNANRQSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20668; Mature: 20668

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFFSIKNVFSVRNLTIMALLAALDVVLARYTTIHLTPQFTLVSFEYIPAAVVSALFGP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHH
WAGIVFGLVSDTVGYFSNPVGPYLPIWAISAMVANLIQSIFLYPGKFDWWRIIVARLLVM
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LIVTMGLNFIWQSIYFGAAAAVYYNSARIISNIIQLPIQVILIRIFGKIAMRTVQRLNAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RQSI
CCCC
>Mature Secondary Structure
MKNFFSIKNVFSVRNLTIMALLAALDVVLARYTTIHLTPQFTLVSFEYIPAAVVSALFGP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHH
WAGIVFGLVSDTVGYFSNPVGPYLPIWAISAMVANLIQSIFLYPGKFDWWRIIVARLLVM
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LIVTMGLNFIWQSIYFGAAAAVYYNSARIISNIIQLPIQVILIRIFGKIAMRTVQRLNAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RQSI
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA