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The map label for this gene is dps [H]

Identifier: 116493127

GI number: 116493127

Start: 1372872

End: 1373354

Strand: Reverse

Name: dps [H]

Synonym: PEPE_1382

Alternate gene names: 116493127

Gene position: 1373354-1372872 (Counterclockwise)

Preceding gene: 116493128

Following gene: 116493123

Centisome position: 74.95

GC content: 35.4

Gene sequence:

>483_bases
ATGTCAGAACATAAAGCACAATTTCCTAAGACAATGGAACAACTCAATCAATTAATTGCAGATATTAGTCAATTAGAAAC
TAATATTCAGCAAACTCATTGGTATATGCGTGGATCAGAATTCTTTAGATTACATCCTCAAATGGATGAATATAACGAAG
AATTAGGTGAACAACTTGATGAAATTGCTGAACGTTTAATTGCTCTGGGTGGTTCACCATATGCTACAACGCATGAATTT
ATTGATCATACCGGATTACCCGACGAAAAGATAACTTGGAATCAATATTCATTACCAGAACTAATGCAACGCCTTAATGA
TCAATTTAAGTATCTTGCCAGTCAGTATCGGATTGGTATGGAAGTATCGGATGAAGAACGGGACTTCTCCACTCAAGATA
TGTTAAACGGATTTAGGGCAGAAGTTGATAAATGGATTTGGATGGTTAGTGCATATCTTAACCAAGGTCCTTTAGATAAA
TAG

Upstream 100 bases:

>100_bases
AAGCTTTTAGAATAAAATTCATATTCTTTGAAATAGAAAACAGTTTCATTTACACTGTAGGCGTAGATGATAAGTTATAA
GTTTGAAAGGGGTATGTAAA

Downstream 100 bases:

>100_bases
AATTTTTTATAAATAATTGAAAAGGCTTAGCCGTTGAAAAACAGCTAAGCCTTTTAGATTGAATTGATATTTTAATCATC
TCCATGATGATCAGCGTAGT

Product: DNA-binding ferritin-like protein (oxidative damage protectant)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSEHKAQFPKTMEQLNQLIADISQLETNIQQTHWYMRGSEFFRLHPQMDEYNEELGEQLDEIAERLIALGGSPYATTHEF
IDHTGLPDEKITWNQYSLPELMQRLNDQFKYLASQYRIGMEVSDEERDFSTQDMLNGFRAEVDKWIWMVSAYLNQGPLDK

Sequences:

>Translated_160_residues
MSEHKAQFPKTMEQLNQLIADISQLETNIQQTHWYMRGSEFFRLHPQMDEYNEELGEQLDEIAERLIALGGSPYATTHEF
IDHTGLPDEKITWNQYSLPELMQRLNDQFKYLASQYRIGMEVSDEERDFSTQDMLNGFRAEVDKWIWMVSAYLNQGPLDK
>Mature_159_residues
SEHKAQFPKTMEQLNQLIADISQLETNIQQTHWYMRGSEFFRLHPQMDEYNEELGEQLDEIAERLIALGGSPYATTHEFI
DHTGLPDEKITWNQYSLPELMQRLNDQFKYLASQYRIGMEVSDEERDFSTQDMLNGFRAEVDKWIWMVSAYLNQGPLDK

Specific function: Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. It binds and incorporates Fe(2+) ion. Effectively inhibits hydroxyl radical formation by the Fenton reaction and is esse

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

Organism=Escherichia coli, GI1787032, Length=148, Percent_Identity=28.3783783783784, Blast_Score=71, Evalue=3e-14,

Paralogues:

None

Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 18913; Mature: 18782

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: PS00818 DPS_1 ; PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHKAQFPKTMEQLNQLIADISQLETNIQQTHWYMRGSEFFRLHPQMDEYNEELGEQLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHHHH
EIAERLIALGGSPYATTHEFIDHTGLPDEKITWNQYSLPELMQRLNDQFKYLASQYRIGM
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
EVSDEERDFSTQDMLNGFRAEVDKWIWMVSAYLNQGPLDK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SEHKAQFPKTMEQLNQLIADISQLETNIQQTHWYMRGSEFFRLHPQMDEYNEELGEQLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHHHH
EIAERLIALGGSPYATTHEFIDHTGLPDEKITWNQYSLPELMQRLNDQFKYLASQYRIGM
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
EVSDEERDFSTQDMLNGFRAEVDKWIWMVSAYLNQGPLDK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10850989 [H]