| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is dagK [H]
Identifier: 116493112
GI number: 116493112
Start: 1354559
End: 1355560
Strand: Reverse
Name: dagK [H]
Synonym: PEPE_1367
Alternate gene names: 116493112
Gene position: 1355560-1354559 (Counterclockwise)
Preceding gene: 116493113
Following gene: 116493111
Centisome position: 73.98
GC content: 38.82
Gene sequence:
>1002_bases ATGCGGAAACGTGCGCGAATTATATATAACCCAACTTCAGGACGTGAAATGATTAAACAACACTTAGTTGAAATTCTTGC GGTAATTGAGAAAGCAGGATATGAGACAAGTGCTTTTGCTACTACACCTGAACCCGATTCTGCCAAAAACGAGGCTCGCC GAGCTGCAAAAGATGGATTTGATTTAGTGGTTGCAGCTGGCGGAGACGGAACGATTAATGAAGTAGTAAATGGAATTGCA CCGTTACTTAGACGTCCTAAAATGGCGATTATCCCGACTGGAACGACCAATGATTATGCGCGGGCTTTACGAATTCCTCG CGAAGATCCAGTGGGTGCTGCCAAAGTTATTTTGCAAAATCAACGACTAAAGATGGATATTGGTAAAGCTGGCGAAAATT ATTTCATTAATATTGCGGCCGGTGGTTTATTAACGGAACTAACTTATGATGTGCCTTCAAACCTTAAAAGTATTTTTGGC TATCTTGCATATATTGTTAAGGGGGCAGAATTACTACCACGGGTAAAACCGGTCGAAATGGACATCGAATATGATGGAGA ACGGTATCATGGTAAAGCTTCCATGTTTTTCCTCGCGTTGACGAATTCAATTGGTGGATTTGAACAAATTGTACCGGATG CCTCTCTGGATGACGGTAAATTTACAATGATTATTGTAAAATCAGGTAATTTACCTAACTTACTCCATTTAATGGTTAAA GCCTTAAATGGAAAACATGTCAATGATTCGCGAATCATTTATCGGAAAGCACGAAAAGTTACGGTCCGTCCAGTAAACGA TCGTGTTATGGTTAATTTGGATGGGGAGTATGGTGGAGATGCTCCTATGGTATTTAAAAATTTAAAACGCCATATTGAAA TGTTCACTAACTTAGATGATGTACCAGTTAATTTGATTAAAGAAGATGACGAATATCGACAAGTGGAACAACAATTTGTC GAAGAAGTTCAAAATCTTCCAGATGATAACAAAATAGATTAA
Upstream 100 bases:
>100_bases GAAACAAACTAAAGGACAAGCTAACCCTAAAGTAGTTAACAAAATCCTAATGCAAGAACTTAATTCTCGTTAGAGGAATA GAATCGGAGGATGACGTACG
Downstream 100 bases:
>100_bases AGAAAAGCTTGAGAAATACGCTGAAATGCGTTACAGTTCTTGAGTAGCACACGAGAATAAAACAGGCTGGTATTAATGTG CCAGCCTGTTTTTATCAGTA
Product: putative lipid kinase
Products: NA
Alternate protein names: DAG kinase; DAGK [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MRKRARIIYNPTSGREMIKQHLVEILAVIEKAGYETSAFATTPEPDSAKNEARRAAKDGFDLVVAAGGDGTINEVVNGIA PLLRRPKMAIIPTGTTNDYARALRIPREDPVGAAKVILQNQRLKMDIGKAGENYFINIAAGGLLTELTYDVPSNLKSIFG YLAYIVKGAELLPRVKPVEMDIEYDGERYHGKASMFFLALTNSIGGFEQIVPDASLDDGKFTMIIVKSGNLPNLLHLMVK ALNGKHVNDSRIIYRKARKVTVRPVNDRVMVNLDGEYGGDAPMVFKNLKRHIEMFTNLDDVPVNLIKEDDEYRQVEQQFV EEVQNLPDDNKID
Sequences:
>Translated_333_residues MRKRARIIYNPTSGREMIKQHLVEILAVIEKAGYETSAFATTPEPDSAKNEARRAAKDGFDLVVAAGGDGTINEVVNGIA PLLRRPKMAIIPTGTTNDYARALRIPREDPVGAAKVILQNQRLKMDIGKAGENYFINIAAGGLLTELTYDVPSNLKSIFG YLAYIVKGAELLPRVKPVEMDIEYDGERYHGKASMFFLALTNSIGGFEQIVPDASLDDGKFTMIIVKSGNLPNLLHLMVK ALNGKHVNDSRIIYRKARKVTVRPVNDRVMVNLDGEYGGDAPMVFKNLKRHIEMFTNLDDVPVNLIKEDDEYRQVEQQFV EEVQNLPDDNKID >Mature_333_residues MRKRARIIYNPTSGREMIKQHLVEILAVIEKAGYETSAFATTPEPDSAKNEARRAAKDGFDLVVAAGGDGTINEVVNGIA PLLRRPKMAIIPTGTTNDYARALRIPREDPVGAAKVILQNQRLKMDIGKAGENYFINIAAGGLLTELTYDVPSNLKSIFG YLAYIVKGAELLPRVKPVEMDIEYDGERYHGKASMFFLALTNSIGGFEQIVPDASLDDGKFTMIIVKSGNLPNLLHLMVK ALNGKHVNDSRIIYRKARKVTVRPVNDRVMVNLDGEYGGDAPMVFKNLKRHIEMFTNLDDVPVNLIKEDDEYRQVEQQFV EEVQNLPDDNKID
Specific function: Catalyzes the phosphorylation of diacylglycerol (DAG) into phosphatidic acid. Is a key enzyme involved in the production of lipoteichoic acid by reintroducing DAG formed from the breakdown of membrane phospholipids into the phosphatidylglycerol biosynthet
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=281, Percent_Identity=29.1814946619217, Blast_Score=97, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017438 - InterPro: IPR005218 - InterPro: IPR001206 [H]
Pfam domain/function: PF00781 DAGK_cat [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 37117; Mature: 37117
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRARIIYNPTSGREMIKQHLVEILAVIEKAGYETSAFATTPEPDSAKNEARRAAKDGF CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHCCCC DLVVAAGGDGTINEVVNGIAPLLRRPKMAIIPTGTTNDYARALRIPREDPVGAAKVILQN EEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCHHHHHHCC QRLKMDIGKAGENYFINIAAGGLLTELTYDVPSNLKSIFGYLAYIVKGAELLPRVKPVEM CCEEEECCCCCCCEEEEEECCCEEHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE DIEYDGERYHGKASMFFLALTNSIGGFEQIVPDASLDDGKFTMIIVKSGNLPNLLHLMVK EEEECCCEECCCCEEEEEEECCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHH ALNGKHVNDSRIIYRKARKVTVRPVNDRVMVNLDGEYGGDAPMVFKNLKRHIEMFTNLDD HHCCCCCCCCHHEEECCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCC VPVNLIKEDDEYRQVEQQFVEEVQNLPDDNKID CCHHEECCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRKRARIIYNPTSGREMIKQHLVEILAVIEKAGYETSAFATTPEPDSAKNEARRAAKDGF CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHCCCC DLVVAAGGDGTINEVVNGIAPLLRRPKMAIIPTGTTNDYARALRIPREDPVGAAKVILQN EEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCHHHHHHCC QRLKMDIGKAGENYFINIAAGGLLTELTYDVPSNLKSIFGYLAYIVKGAELLPRVKPVEM CCEEEECCCCCCCEEEEEECCCEEHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE DIEYDGERYHGKASMFFLALTNSIGGFEQIVPDASLDDGKFTMIIVKSGNLPNLLHLMVK EEEECCCEECCCCEEEEEEECCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHH ALNGKHVNDSRIIYRKARKVTVRPVNDRVMVNLDGEYGGDAPMVFKNLKRHIEMFTNLDD HHCCCCCCCCHHEEECCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCC VPVNLIKEDDEYRQVEQQFVEEVQNLPDDNKID CCHHEECCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]