| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is mrr [C]
Identifier: 116493110
GI number: 116493110
Start: 1352042
End: 1352929
Strand: Reverse
Name: mrr [C]
Synonym: PEPE_1365
Alternate gene names: 116493110
Gene position: 1352929-1352042 (Counterclockwise)
Preceding gene: 116493111
Following gene: 116493108
Centisome position: 73.83
GC content: 34.46
Gene sequence:
>888_bases ATGGCTAGTCAACAAATAAAAATCGAGAACATTACTATGAATGAGGTATTAAAGGCAATGCATCGATTAGGAGGTCAAGT TACAAGAAAGGATATTCGGCAAGATATACGAGATAATTCAGATGTAATTTCCGATAATGAAGTAGATAAAGTTAGGGTAT CAAAAAAAACGGGCAACAAGTACAGACCCTTTAATTGGACATTAAATTTTGCCATTAAGTATCTTATCATGACAGATTAT ATCGAAACAGAAGATAATCGAGAATTAGAGTTATCAAAAAAAGGTCGTAATATTAATTTTCTAGAATTTGATGCAGCAAG GTACGTGAGGCCTATTGTTGAAAAACAGTTAGTTGAGGAAAAAGAGAATAAAATTTCGGTTATCGAAGAAGTTGAAAGTG AACAGGTCGAGCCTGATGCTAGAGAAGAATCTTGGCGAGAGCAATTACTAAATGCATTAATAAAGATGAATCCTAAGAAA TTTGAACTTTTCTGCCGAGGATTATTAAAGAAAATGGACATTGATGTTGACGATGTAATTGGTGTAAAGTTTGTCGCTGA TGGAGGCCTAGATGGTTTTGGATATGTCCGTTCGGATGATTATCGAACTACTCGTGTAGCTCTTCAAGTTAAACGTTGGC AAAGTAAGGTGTCCGCTCCTGAGATTGATAAATTTCGTGGTGCTATGGACAAATTCAATGCCGAATTTGGGATCTTTATT ACTAATTCAGATTTTACTCGAGAAGCCGTTGAAACTGCTCGTCAAGGTACAAGAATTATTACATTAATTAATGGCGATCA AATTTGTGATCTAGTTGCTAAATATAATTATTACGTTGAGCCTGTAACTACATACCGACTTAAAGAATTTTATTTGGATA AGGATTAA
Upstream 100 bases:
>100_bases TTATTCGAAAATAAGTAGTACGCTTTTTTATTAAAATTATGATAAGAAACGGATTAAATATTATAATTGATTACAGAACG AAAGTATGGAGGGCAATGTG
Downstream 100 bases:
>100_bases CAATGGTTATTTGTACAATTCAGACTTGTAAGGTATATCGAGGAATTTTAGTAAAGATAGTTTTTAATGCAATCCAGCAT TTTCTATAAATTTAAAAGAT
Product: restriction endonuclease
Products: NA
Alternate protein names: Mrr Restriction System Protein; 5-Methylcytosine-Specific Restriction; 5-Methylcytosine-Specific Restriction Endonuclease; C-Terminus Restriction Endonuclease Mrr; Mrr Restiction System Protein; Mrr Restriction Endonuclease
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MASQQIKIENITMNEVLKAMHRLGGQVTRKDIRQDIRDNSDVISDNEVDKVRVSKKTGNKYRPFNWTLNFAIKYLIMTDY IETEDNRELELSKKGRNINFLEFDAARYVRPIVEKQLVEEKENKISVIEEVESEQVEPDAREESWREQLLNALIKMNPKK FELFCRGLLKKMDIDVDDVIGVKFVADGGLDGFGYVRSDDYRTTRVALQVKRWQSKVSAPEIDKFRGAMDKFNAEFGIFI TNSDFTREAVETARQGTRIITLINGDQICDLVAKYNYYVEPVTTYRLKEFYLDKD
Sequences:
>Translated_295_residues MASQQIKIENITMNEVLKAMHRLGGQVTRKDIRQDIRDNSDVISDNEVDKVRVSKKTGNKYRPFNWTLNFAIKYLIMTDY IETEDNRELELSKKGRNINFLEFDAARYVRPIVEKQLVEEKENKISVIEEVESEQVEPDAREESWREQLLNALIKMNPKK FELFCRGLLKKMDIDVDDVIGVKFVADGGLDGFGYVRSDDYRTTRVALQVKRWQSKVSAPEIDKFRGAMDKFNAEFGIFI TNSDFTREAVETARQGTRIITLINGDQICDLVAKYNYYVEPVTTYRLKEFYLDKD >Mature_294_residues ASQQIKIENITMNEVLKAMHRLGGQVTRKDIRQDIRDNSDVISDNEVDKVRVSKKTGNKYRPFNWTLNFAIKYLIMTDYI ETEDNRELELSKKGRNINFLEFDAARYVRPIVEKQLVEEKENKISVIEEVESEQVEPDAREESWREQLLNALIKMNPKKF ELFCRGLLKKMDIDVDDVIGVKFVADGGLDGFGYVRSDDYRTTRVALQVKRWQSKVSAPEIDKFRGAMDKFNAEFGIFIT NSDFTREAVETARQGTRIITLINGDQICDLVAKYNYYVEPVTTYRLKEFYLDKD
Specific function: Involved In The Acceptance Of Foreign DNA Which Is Modified. Restricts Both Adenine- And Cytosine-Methylated DNA. [C]
COG id: COG1715
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34430; Mature: 34298
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQQIKIENITMNEVLKAMHRLGGQVTRKDIRQDIRDNSDVISDNEVDKVRVSKKTGNK CCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCC YRPFNWTLNFAIKYLIMTDYIETEDNRELELSKKGRNINFLEFDAARYVRPIVEKQLVEE CCCCEEEHHHHHEEHHHHHHHCCCCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHHHH KENKISVIEEVESEQVEPDAREESWREQLLNALIKMNPKKFELFCRGLLKKMDIDVDDVI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHC GVKFVADGGLDGFGYVRSDDYRTTRVALQVKRWQSKVSAPEIDKFRGAMDKFNAEFGIFI CEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEE TNSDFTREAVETARQGTRIITLINGDQICDLVAKYNYYVEPVTTYRLKEFYLDKD ECCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCEEECCHHHHHHHHHHCCCC >Mature Secondary Structure ASQQIKIENITMNEVLKAMHRLGGQVTRKDIRQDIRDNSDVISDNEVDKVRVSKKTGNK CCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCC YRPFNWTLNFAIKYLIMTDYIETEDNRELELSKKGRNINFLEFDAARYVRPIVEKQLVEE CCCCEEEHHHHHEEHHHHHHHCCCCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHHHH KENKISVIEEVESEQVEPDAREESWREQLLNALIKMNPKKFELFCRGLLKKMDIDVDDVI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHC GVKFVADGGLDGFGYVRSDDYRTTRVALQVKRWQSKVSAPEIDKFRGAMDKFNAEFGIFI CEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEE TNSDFTREAVETARQGTRIITLINGDQICDLVAKYNYYVEPVTTYRLKEFYLDKD ECCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCEEECCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA