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The map label for this gene is ybbE [H]

Identifier: 116493083

GI number: 116493083

Start: 1324360

End: 1325358

Strand: Reverse

Name: ybbE [H]

Synonym: PEPE_1335

Alternate gene names: 116493083

Gene position: 1325358-1324360 (Counterclockwise)

Preceding gene: 116493084

Following gene: 116493082

Centisome position: 72.33

GC content: 39.04

Gene sequence:

>999_bases
ATGGTATTTACTGATACAGAAAATTTAATTCAAGCGATGTTGGAGCAACAGATAATTCCTGGAGCAGACTATACTTTTAT
TCATCATGGAAGGTTAGTTCATGAGGTAACCACAGGCTATAGCAGCGTAGTACCGATTAAACGGCGCTTAGCGCAAGGTG
AGTATTTTGATGTAGCTTCTTTAACCAAAGTTATGGGGACGGTTCCTTTGACGCTCTGGTTAGAACAACAGGGAAGGATT
AATTTAGAAGCCCCAGTGAGCCAATACCTTCCCCAAATTAAAGATGCAAGAGTTACGTTACGTCATTTGTTGACGCATAC
TTCGGGGGCTAAGGCTTGGATTGATCAGCGGGATGAATTAAATGCGAGTGAATTACGGGAAGCTATCTACAATAATTTAA
CTTTTGGAGCTGATTTTAATCAAAAAGTTGTTTATAACGATTATAATTTCCTATTGCTGGGCTTTATAATTGAACGGGTA
TTACATATGCCGGTTCAAGTAGCAATTCAGAAATATGTGTTGCAGCCTTGGGGATTAGAAGCCAGTAGCTTCACCCCTGA
TCCTCATCAAGCTATTCCAACGCAAGTCCGCAATGGCATCTTAACTAAGGGACAGGTACATGATCCTAAGGCCGCTTCGT
TAGGCTTGCATGCTGGTTCAGCAGGACTATTTTCTACCAAACATGATGTGGTTAAATTTACCCTGAAAATGTTAGCAAAT
GAAAATGAACTTTTGGATGAAACAACCATGCGTCAATTCGAAGGTAATCAAACGACTAATTCTAAATTACTCCGTTCATG
GGGCTGGGCGTTTGTTACTAGAAAACCACATCAAGTTCTACTCAGACATAGCGGTTTCACTGGAACATTTATTTTATTGG
ATCGTTTAACACAAAATGGGTTGGTATTCTTATCTAATCGGGTTCACCCGCAACCTAATTTGGAATTTTTAGAATATCGA
CAAAAAATTTATCAAACTTTTGCCAAAGAAGATTTTTAA

Upstream 100 bases:

>100_bases
TTTTTAATGGGTTATTCTTCGTTTGAAACAAAACGGAGAATAACCCATTTTTTGTTATATAATGCTATTGGAATTTAGGA
AACGGACGGTAGGAATAAAA

Downstream 100 bases:

>100_bases
AAATGTAACTTAAAGAACAATTGATGATGTGGTATTCTTAGGTAATGAGTAGATGAAAGGGGTTTTATAGAGCATGAGTG
AACCATTATTTTTAAATCCA

Product: Beta-lactamase class C related penicillin binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MVFTDTENLIQAMLEQQIIPGADYTFIHHGRLVHEVTTGYSSVVPIKRRLAQGEYFDVASLTKVMGTVPLTLWLEQQGRI
NLEAPVSQYLPQIKDARVTLRHLLTHTSGAKAWIDQRDELNASELREAIYNNLTFGADFNQKVVYNDYNFLLLGFIIERV
LHMPVQVAIQKYVLQPWGLEASSFTPDPHQAIPTQVRNGILTKGQVHDPKAASLGLHAGSAGLFSTKHDVVKFTLKMLAN
ENELLDETTMRQFEGNQTTNSKLLRSWGWAFVTRKPHQVLLRHSGFTGTFILLDRLTQNGLVFLSNRVHPQPNLEFLEYR
QKIYQTFAKEDF

Sequences:

>Translated_332_residues
MVFTDTENLIQAMLEQQIIPGADYTFIHHGRLVHEVTTGYSSVVPIKRRLAQGEYFDVASLTKVMGTVPLTLWLEQQGRI
NLEAPVSQYLPQIKDARVTLRHLLTHTSGAKAWIDQRDELNASELREAIYNNLTFGADFNQKVVYNDYNFLLLGFIIERV
LHMPVQVAIQKYVLQPWGLEASSFTPDPHQAIPTQVRNGILTKGQVHDPKAASLGLHAGSAGLFSTKHDVVKFTLKMLAN
ENELLDETTMRQFEGNQTTNSKLLRSWGWAFVTRKPHQVLLRHSGFTGTFILLDRLTQNGLVFLSNRVHPQPNLEFLEYR
QKIYQTFAKEDF
>Mature_332_residues
MVFTDTENLIQAMLEQQIIPGADYTFIHHGRLVHEVTTGYSSVVPIKRRLAQGEYFDVASLTKVMGTVPLTLWLEQQGRI
NLEAPVSQYLPQIKDARVTLRHLLTHTSGAKAWIDQRDELNASELREAIYNNLTFGADFNQKVVYNDYNFLLLGFIIERV
LHMPVQVAIQKYVLQPWGLEASSFTPDPHQAIPTQVRNGILTKGQVHDPKAASLGLHAGSAGLFSTKHDVVKFTLKMLAN
ENELLDETTMRQFEGNQTTNSKLLRSWGWAFVTRKPHQVLLRHSGFTGTFILLDRLTQNGLVFLSNRVHPQPNLEFLEYR
QKIYQTFAKEDF

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0214 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR022849 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 37844; Mature: 37844

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFTDTENLIQAMLEQQIIPGADYTFIHHGRLVHEVTTGYSSVVPIKRRLAQGEYFDVAS
CCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHCCCCCCCHHH
LTKVMGTVPLTLWLEQQGRINLEAPVSQYLPQIKDARVTLRHLLTHTSGAKAWIDQRDEL
HHHHHHCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCC
NASELREAIYNNLTFGADFNQKVVYNDYNFLLLGFIIERVLHMPVQVAIQKYVLQPWGLE
CHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC
ASSFTPDPHQAIPTQVRNGILTKGQVHDPKAASLGLHAGSAGLFSTKHDVVKFTLKMLAN
CCCCCCCCHHHCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC
ENELLDETTMRQFEGNQTTNSKLLRSWGWAFVTRKPHQVLLRHSGFTGTFILLDRLTQNG
CHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCHHHHHHHCCCCCCHHHHHHHHCCCC
LVFLSNRVHPQPNLEFLEYRQKIYQTFAKEDF
EEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVFTDTENLIQAMLEQQIIPGADYTFIHHGRLVHEVTTGYSSVVPIKRRLAQGEYFDVAS
CCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHCCCCCCCHHH
LTKVMGTVPLTLWLEQQGRINLEAPVSQYLPQIKDARVTLRHLLTHTSGAKAWIDQRDEL
HHHHHHCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCC
NASELREAIYNNLTFGADFNQKVVYNDYNFLLLGFIIERVLHMPVQVAIQKYVLQPWGLE
CHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC
ASSFTPDPHQAIPTQVRNGILTKGQVHDPKAASLGLHAGSAGLFSTKHDVVKFTLKMLAN
CCCCCCCCHHHCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC
ENELLDETTMRQFEGNQTTNSKLLRSWGWAFVTRKPHQVLLRHSGFTGTFILLDRLTQNG
CHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCHHHHHHHCCCCCCHHHHHHHHCCCC
LVFLSNRVHPQPNLEFLEYRQKIYQTFAKEDF
EEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]