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The map label for this gene is atpF

Identifier: 116493069

GI number: 116493069

Start: 1310336

End: 1310857

Strand: Reverse

Name: atpF

Synonym: PEPE_1321

Alternate gene names: 116493069

Gene position: 1310857-1310336 (Counterclockwise)

Preceding gene: 116493070

Following gene: 116493068

Centisome position: 71.54

GC content: 36.97

Gene sequence:

>522_bases
ATGTTTTCGCACATTATAGTAGGGGCGGCACATGGAAGTACTTTGTACGTTGGTGATATGTTGTTTTATGCCATCTTGTT
TATTGTATTAATGGCTTTAATTGCAAAATTTGCGTGGGGTCCAGTTAATGCAATGTTGAAGGAACGTGCTGATCGTATCT
CTAACGACATTGACTCAGCTGAACAGTCTCGAATCGAGGCTGAAAAGCTTGCTAAACAACGTAAAGAAGCATTAGATAAT
TCTCATGCTGAAGCTACTTCTATCATTAACAATGCTAAAGATAGTGGTGCAAAAGAACGAGAATTGATTATTGGAAATGC
TCAAAATGAAGCTAAGTCTCTAAAGGACAAGGCTAAACAAGATATTGAACAAGAACGTGCTGACGCACTTAAAAGTGCAC
AAGACGATATTGCGTCATTATCTATTGAGATTGCTTCCAAAGTTATCAAAAAAGAACTTGATGAAAACAGTCAAAAGGAT
TTGATTGATTCATACATCGAAGGTTTGGGTGATAGCAAATGA

Upstream 100 bases:

>100_bases
TTGAAGCTATGCCTATCCTTGCCTTCGTTATTTCACTTCTTGTAATGAATAAGTAGGCATGATAAATTAAACAATTTATC
GGAGAAGGAGGTGTCAATAG

Downstream 100 bases:

>100_bases
GTTTAGATAAAACAACAATTGCTAAGCGTTATTCAAAAGCCCTCTTTGAAATTGTTTCTGAAAAAGGACAACGCGATGAA
ACACGTGCTGAACTAAATCA

Product: F0F1-type ATP synthase, subunit b

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MFSHIIVGAAHGSTLYVGDMLFYAILFIVLMALIAKFAWGPVNAMLKERADRISNDIDSAEQSRIEAEKLAKQRKEALDN
SHAEATSIINNAKDSGAKERELIIGNAQNEAKSLKDKAKQDIEQERADALKSAQDDIASLSIEIASKVIKKELDENSQKD
LIDSYIEGLGDSK

Sequences:

>Translated_173_residues
MFSHIIVGAAHGSTLYVGDMLFYAILFIVLMALIAKFAWGPVNAMLKERADRISNDIDSAEQSRIEAEKLAKQRKEALDN
SHAEATSIINNAKDSGAKERELIIGNAQNEAKSLKDKAKQDIEQERADALKSAQDDIASLSIEIASKVIKKELDENSQKD
LIDSYIEGLGDSK
>Mature_173_residues
MFSHIIVGAAHGSTLYVGDMLFYAILFIVLMALIAKFAWGPVNAMLKERADRISNDIDSAEQSRIEAEKLAKQRKEALDN
SHAEATSIINNAKDSGAKERELIIGNAQNEAKSLKDKAKQDIEQERADALKSAQDDIASLSIEIASKVIKKELDENSQKD
LIDSYIEGLGDSK

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_PEDPA (Q03EL0)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_804804.1
- STRING:   Q03EL0
- GeneID:   4417008
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_1321
- NMPDR:   fig|278197.10.peg.1159
- eggNOG:   COG0711
- HOGENOM:   HBG617328
- OMA:   NPGLIFW
- BioCyc:   PPEN278197:PEPE_1321-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19006; Mature: 19006

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13f4b960)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSHIIVGAAHGSTLYVGDMLFYAILFIVLMALIAKFAWGPVNAMLKERADRISNDIDSA
CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EQSRIEAEKLAKQRKEALDNSHAEATSIINNAKDSGAKERELIIGNAQNEAKSLKDKAKQ
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHH
DIEQERADALKSAQDDIASLSIEIASKVIKKELDENSQKDLIDSYIEGLGDSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MFSHIIVGAAHGSTLYVGDMLFYAILFIVLMALIAKFAWGPVNAMLKERADRISNDIDSA
CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EQSRIEAEKLAKQRKEALDNSHAEATSIINNAKDSGAKERELIIGNAQNEAKSLKDKAKQ
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHH
DIEQERADALKSAQDDIASLSIEIASKVIKKELDENSQKDLIDSYIEGLGDSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA