| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is 116492970
Identifier: 116492970
GI number: 116492970
Start: 1208591
End: 1209076
Strand: Direct
Name: 116492970
Synonym: PEPE_1209
Alternate gene names: NA
Gene position: 1208591-1209076 (Clockwise)
Preceding gene: 116492965
Following gene: 116492971
Centisome position: 65.96
GC content: 32.72
Gene sequence:
>486_bases ATGAAAAATTTAAATGTATCTTTCGGTAGTGAACCCGTTTTAAGAGAAATCAAAGAAAAATATGCTTCTCGTAAGATGAC TTTATTATCAAACTCTGCTAAAGAAACTAGCTTTCAATTAGTTGATTTTTCCGACCAGAAAAATGTTTTTTACTCACCTA ATCGTTATAGAGTTCTTTTTGAAAGTCCATTCTTAAATATGGGTGATATTTTTATTTATGATTTTTTTGATTTAGCAGGT GATTCTCTCTCAGCTTTTGATGAAAAGGTGCGTCATTGGAGTGGCATTAATGCTGACTCTAGTTTTTTGCAAAGTGTACT TTTACTATCTCCTCTAGATGGAAAACCACATAATCGTGCTGTTCTAACCATCTGGAGTACGAATAAGTCCGATCAAGTCA CTTTAGATACACACGATCTGAAAAAAACTTTGGAGCCTTACGTGAACCATAACTATTTTAGAACTACTTATAAAGTACTG TCGTAA
Upstream 100 bases:
>100_bases CTCCCAATTACTTTATATATCTATTTTAACGCAAAGTTATAATGGTTTTCGATTCGTTTTAAAACAACTATAATAGAATA TGGATGGAGGTGCTTATGTA
Downstream 100 bases:
>100_bases TACTATGAAATTATAGTTATTATACTGTATACTGTTATAACGTATATAGAAAGGAATGGTTCAAATTTTCTTAAAGAAGA ACAATAAGGCTTTAATTTCA
Product: monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKNLNVSFGSEPVLREIKEKYASRKMTLLSNSAKETSFQLVDFSDQKNVFYSPNRYRVLFESPFLNMGDIFIYDFFDLAG DSLSAFDEKVRHWSGINADSSFLQSVLLLSPLDGKPHNRAVLTIWSTNKSDQVTLDTHDLKKTLEPYVNHNYFRTTYKVL S
Sequences:
>Translated_161_residues MKNLNVSFGSEPVLREIKEKYASRKMTLLSNSAKETSFQLVDFSDQKNVFYSPNRYRVLFESPFLNMGDIFIYDFFDLAG DSLSAFDEKVRHWSGINADSSFLQSVLLLSPLDGKPHNRAVLTIWSTNKSDQVTLDTHDLKKTLEPYVNHNYFRTTYKVL S >Mature_161_residues MKNLNVSFGSEPVLREIKEKYASRKMTLLSNSAKETSFQLVDFSDQKNVFYSPNRYRVLFESPFLNMGDIFIYDFFDLAG DSLSAFDEKVRHWSGINADSSFLQSVLLLSPLDGKPHNRAVLTIWSTNKSDQVTLDTHDLKKTLEPYVNHNYFRTTYKVL S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18590; Mature: 18590
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLNVSFGSEPVLREIKEKYASRKMTLLSNSAKETSFQLVDFSDQKNVFYSPNRYRVLF CCCCCCCCCCCHHHHHHHHHHHHHEEHHHCCCCCCCEEEEEECCCCCCEEECCCEEEEEE ESPFLNMGDIFIYDFFDLAGDSLSAFDEKVRHWSGINADSSFLQSVLLLSPLDGKPHNRA ECCCCCCCCEEEEEHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCE VLTIWSTNKSDQVTLDTHDLKKTLEPYVNHNYFRTTYKVLS EEEEEECCCCCEEEECHHHHHHHHHHHHCCCCHHHHEEECC >Mature Secondary Structure MKNLNVSFGSEPVLREIKEKYASRKMTLLSNSAKETSFQLVDFSDQKNVFYSPNRYRVLF CCCCCCCCCCCHHHHHHHHHHHHHEEHHHCCCCCCCEEEEEECCCCCCEEECCCEEEEEE ESPFLNMGDIFIYDFFDLAGDSLSAFDEKVRHWSGINADSSFLQSVLLLSPLDGKPHNRA ECCCCCCCCEEEEEHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCE VLTIWSTNKSDQVTLDTHDLKKTLEPYVNHNYFRTTYKVLS EEEEEECCCCCEEEECHHHHHHHHHHHHCCCCHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA