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The map label for this gene is ybhE [C]

Identifier: 116492959

GI number: 116492959

Start: 1198904

End: 1199914

Strand: Direct

Name: ybhE [C]

Synonym: PEPE_1198

Alternate gene names: 116492959

Gene position: 1198904-1199914 (Clockwise)

Preceding gene: 116492954

Following gene: 116492960

Centisome position: 65.43

GC content: 35.91

Gene sequence:

>1011_bases
ATGATTGAATCCATTTTATTAGGAACGTATACAAAACAAACTAGTAAGGGTATTTATCAAATTGATTTAGATACTGATTC
AAAACAGTTAACTAATTTACAGTTAGTTACCGAAGTTGAAAACCCCACTTATTTAGCACTTAGCAAGAAAAATATTTTAT
ATGCTGTTGACCGTTTTGATAACCAAGGTGGCTTATCTGTTACAGATTTATATTCACCCCAAAACGTTCTTCAACATATC
GTAACTCCTGGTACTCCTCCGGCTTATGTCACAGTTGATGAAAAACATCAATTCGTCTTTGATGCAAACTATCACGAAGG
TACTCTTCATGCCTATAGTATTAATAATGATCACACACTAACCCTAGGTAGTACTTTTACTAATACGGGTAAAGGCCCTC
TAAAAGAGCAAGACGGTTCACATTTGCATTACGTTGACCGCACTCCTGACGGTAAATTGATTGCTTGTGATTTAGGGACT
GACCAAGTTTTCGTTTTAGATTATGATTCAACTGGTTTTAAAATTATTAGCACTTTCGAAACCACTCCTGGATTTGGCCC
ACGCCATATAGTTTTCAATAATACTGGTGATACAGCCTACCTAGTTGGTGAATTATCCAGCTCGGTAGCAGTACTTAATT
ATAAGGATTGCCAGCTAACCCATCTCCAAACTATTAAGACCATTCCGGATGATTGGAACCAACATAATGGTTGTGCGGCA
ATTCGCATTACTGATGATAGTCGCTTCTTATACGTTTCAAATCGCGGTTATGATTCCATTGCCGTTTTTGAAATCCAAGC
TGATGGTCAATTGAAACTCATCCAAAATATCAGTGTTGAAGGAAGTTTTCCTCGTGACTTTGCTTTAAGTCATGAACAAA
ACTTTTTAGTAGTCGGAAACCAAACTACTAATAATTTATCTTTATTTGAAAGAAATTCTAATGATGGTAAACTGGAATTG
ATTCAAAAAGACGTTGCAGCTCCTGAAGTTGTATGTGTTCACTTTAAATAA

Upstream 100 bases:

>100_bases
ATCATATCGCATAGTATTATCCCTTTAGTAAGCGCATTCAATACTAACTAAATGTGGTATACTTGTTGTTAATGTTTAAA
AGAGCAAGGAGGACTATTTT

Downstream 100 bases:

>100_bases
AAAGAACGGAGAGAATTATGTTTAAAGAAATTCCAGTAGAAAATTTTACTGATATTCCAGCTTTAATTGCTAAAGGTGCC
AATCGAATTGAACTTTGCGA

Product: 3-carboxymuconate cyclase

Products: NA

Alternate protein names: ORFB [H]

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MIESILLGTYTKQTSKGIYQIDLDTDSKQLTNLQLVTEVENPTYLALSKKNILYAVDRFDNQGGLSVTDLYSPQNVLQHI
VTPGTPPAYVTVDEKHQFVFDANYHEGTLHAYSINNDHTLTLGSTFTNTGKGPLKEQDGSHLHYVDRTPDGKLIACDLGT
DQVFVLDYDSTGFKIISTFETTPGFGPRHIVFNNTGDTAYLVGELSSSVAVLNYKDCQLTHLQTIKTIPDDWNQHNGCAA
IRITDDSRFLYVSNRGYDSIAVFEIQADGQLKLIQNISVEGSFPRDFALSHEQNFLVVGNQTTNNLSLFERNSNDGKLEL
IQKDVAAPEVVCVHFK

Sequences:

>Translated_336_residues
MIESILLGTYTKQTSKGIYQIDLDTDSKQLTNLQLVTEVENPTYLALSKKNILYAVDRFDNQGGLSVTDLYSPQNVLQHI
VTPGTPPAYVTVDEKHQFVFDANYHEGTLHAYSINNDHTLTLGSTFTNTGKGPLKEQDGSHLHYVDRTPDGKLIACDLGT
DQVFVLDYDSTGFKIISTFETTPGFGPRHIVFNNTGDTAYLVGELSSSVAVLNYKDCQLTHLQTIKTIPDDWNQHNGCAA
IRITDDSRFLYVSNRGYDSIAVFEIQADGQLKLIQNISVEGSFPRDFALSHEQNFLVVGNQTTNNLSLFERNSNDGKLEL
IQKDVAAPEVVCVHFK
>Mature_336_residues
MIESILLGTYTKQTSKGIYQIDLDTDSKQLTNLQLVTEVENPTYLALSKKNILYAVDRFDNQGGLSVTDLYSPQNVLQHI
VTPGTPPAYVTVDEKHQFVFDANYHEGTLHAYSINNDHTLTLGSTFTNTGKGPLKEQDGSHLHYVDRTPDGKLIACDLGT
DQVFVLDYDSTGFKIISTFETTPGFGPRHIVFNNTGDTAYLVGELSSSVAVLNYKDCQLTHLQTIKTIPDDWNQHNGCAA
IRITDDSRFLYVSNRGYDSIAVFEIQADGQLKLIQNISVEGSFPRDFALSHEQNFLVVGNQTTNNLSLFERNSNDGKLEL
IQKDVAAPEVVCVHFK

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=242, Percent_Identity=28.099173553719, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 37376; Mature: 37376

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIESILLGTYTKQTSKGIYQIDLDTDSKQLTNLQLVTEVENPTYLALSKKNILYAVDRFD
CCCCEEEEEECHHCCCCEEEEEECCCCCHHEEEEEEEEECCCEEEEEECCCEEEEEEECC
NQGGLSVTDLYSPQNVLQHIVTPGTPPAYVTVDEKHQFVFDANYHEGTLHAYSINNDHTL
CCCCEEEEECCCHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEEECCCCEE
TLGSTFTNTGKGPLKEQDGSHLHYVDRTPDGKLIACDLGTDQVFVLDYDSTGFKIISTFE
EECCEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEEECCCCEEEEEEEC
TTPGFGPRHIVFNNTGDTAYLVGELSSSVAVLNYKDCQLTHLQTIKTIPDDWNQHNGCAA
CCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCEEE
IRITDDSRFLYVSNRGYDSIAVFEIQADGQLKLIQNISVEGSFPRDFALSHEQNFLVVGN
EEEECCCEEEEEECCCCCEEEEEEEECCCEEEEEEEEEECCCCCCCEECCCCCCEEEECC
QTTNNLSLFERNSNDGKLELIQKDVAAPEVVCVHFK
CCCCCEEEEEECCCCCEEEEEEHHCCCCEEEEEEEC
>Mature Secondary Structure
MIESILLGTYTKQTSKGIYQIDLDTDSKQLTNLQLVTEVENPTYLALSKKNILYAVDRFD
CCCCEEEEEECHHCCCCEEEEEECCCCCHHEEEEEEEEECCCEEEEEECCCEEEEEEECC
NQGGLSVTDLYSPQNVLQHIVTPGTPPAYVTVDEKHQFVFDANYHEGTLHAYSINNDHTL
CCCCEEEEECCCHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEEECCCCEE
TLGSTFTNTGKGPLKEQDGSHLHYVDRTPDGKLIACDLGTDQVFVLDYDSTGFKIISTFE
EECCEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEEECCCCEEEEEEEC
TTPGFGPRHIVFNNTGDTAYLVGELSSSVAVLNYKDCQLTHLQTIKTIPDDWNQHNGCAA
CCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCEEE
IRITDDSRFLYVSNRGYDSIAVFEIQADGQLKLIQNISVEGSFPRDFALSHEQNFLVVGN
EEEECCCEEEEEECCCCCEEEEEEEECCCEEEEEEEEEECCCCCCCEECCCCCCEEEECC
QTTNNLSLFERNSNDGKLELIQKDVAAPEVVCVHFK
CCCCCEEEEEECCCCCEEEEEEHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9620952 [H]