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The map label for this gene is ylmH [H]

Identifier: 116492942

GI number: 116492942

Start: 1181118

End: 1181903

Strand: Reverse

Name: ylmH [H]

Synonym: PEPE_1181

Alternate gene names: 116492942

Gene position: 1181903-1181118 (Counterclockwise)

Preceding gene: 116492943

Following gene: 116492941

Centisome position: 64.5

GC content: 31.04

Gene sequence:

>786_bases
ATGGATAATCAAATTACACAGCATTTTAGAAAAGAAGAGCAGGAATTAATTGAGAGCTTTTCATCTTCACTCCAAGAGGC
TTTAGATCAAAATCGTCCAATTTTAACTAATTTTTTAAATCCCCGAGAACAACATATTCTCCAAACCCTAGTTAATCGAT
TTCCTGAACTAAAGGTTTATTTTAATGGAGGGTTTAGCGAGGCAGAAAATAAGCGAGCATTGATTACACCAGATTATTTT
GTTCCTGCGGAAGATGATTTTTCTGTTAGAATCTTTGAAATTAATTATCCAATTAATTTTACAGATTTAGAACATCGTCA
GATTTTAGGAACATTGGTTAATGCTGGTATTAAACGAAGTACTTTTGGTGATATAGTTCATCAAGCAGAACGCTGGCAAT
TTGCTGTCAATGGAGAATTAGAAAATTTCTTTTTAAATGAAATTGATCGAATTGGTAAAATAAAAGTTAAATTGATTCCT
ACTTCAACAAATGATATTTTAAAAGTTCAAGATGATTGGGAGCCTGTTAACCAGACTGTAGCATCTTTAAGAATGGATTC
AATTATTTCAACAGGATTTTCGATCTCTCGTCATCGAGTGAAAGAACTGATTGAAAAACGTTTAGTTCAATTAAATTGGA
TGATTGATGAGAAAGCTGATACTTTAATTGCGTTAAATGATGTTATTTCAGTTCGAAAATATGGTAGGATAAAACTTGTT
GATATTCTTGGAAAAACAAAAAAAGATAAACTTAAGATCCAGCTGGATATAATCAAAACTAGATAG

Upstream 100 bases:

>100_bases
TTGGAATAGATTTTTCGCCGATATTAGCTTTGTTAGTTCTTGAACTGTGTGCAAATGGATTAGTTTTTCTTGAAACCTTA
ATGCTTGGTGTAATTTAACT

Downstream 100 bases:

>100_bases
TGAGTTATGGGGGTTTTATTAAAATGTCAATTGAACCACAAGATATACAACAAAAACAATTTTCAAATAAAATGCGAGGA
TACAATCCAGTCGAAGTTGA

Product: cell division protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MDNQITQHFRKEEQELIESFSSSLQEALDQNRPILTNFLNPREQHILQTLVNRFPELKVYFNGGFSEAENKRALITPDYF
VPAEDDFSVRIFEINYPINFTDLEHRQILGTLVNAGIKRSTFGDIVHQAERWQFAVNGELENFFLNEIDRIGKIKVKLIP
TSTNDILKVQDDWEPVNQTVASLRMDSIISTGFSISRHRVKELIEKRLVQLNWMIDEKADTLIALNDVISVRKYGRIKLV
DILGKTKKDKLKIQLDIIKTR

Sequences:

>Translated_261_residues
MDNQITQHFRKEEQELIESFSSSLQEALDQNRPILTNFLNPREQHILQTLVNRFPELKVYFNGGFSEAENKRALITPDYF
VPAEDDFSVRIFEINYPINFTDLEHRQILGTLVNAGIKRSTFGDIVHQAERWQFAVNGELENFFLNEIDRIGKIKVKLIP
TSTNDILKVQDDWEPVNQTVASLRMDSIISTGFSISRHRVKELIEKRLVQLNWMIDEKADTLIALNDVISVRKYGRIKLV
DILGKTKKDKLKIQLDIIKTR
>Mature_261_residues
MDNQITQHFRKEEQELIESFSSSLQEALDQNRPILTNFLNPREQHILQTLVNRFPELKVYFNGGFSEAENKRALITPDYF
VPAEDDFSVRIFEINYPINFTDLEHRQILGTLVNAGIKRSTFGDIVHQAERWQFAVNGELENFFLNEIDRIGKIKVKLIP
TSTNDILKVQDDWEPVNQTVASLRMDSIISTGFSISRHRVKELIEKRLVQLNWMIDEKADTLIALNDVISVRKYGRIKLV
DILGKTKKDKLKIQLDIIKTR

Specific function: Unknown

COG id: COG2302

COG function: function code S; Uncharacterized conserved protein, contains S4-like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 30384; Mature: 30384

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNQITQHFRKEEQELIESFSSSLQEALDQNRPILTNFLNPREQHILQTLVNRFPELKVY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCHHHHHHHHHHHHCCCCEEEE
FNGGFSEAENKRALITPDYFVPAEDDFSVRIFEINYPINFTDLEHRQILGTLVNAGIKRS
ECCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCH
TFGDIVHQAERWQFAVNGELENFFLNEIDRIGKIKVKLIPTSTNDILKVQDDWEPVNQTV
HHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCEEEEEEEECCCCCEEEECCCCCHHHHHH
ASLRMDSIISTGFSISRHRVKELIEKRLVQLNWMIDEKADTLIALNDVISVRKYGRIKLV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEHHHHHHHHHCCCEEEE
DILGKTKKDKLKIQLDIIKTR
EECCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MDNQITQHFRKEEQELIESFSSSLQEALDQNRPILTNFLNPREQHILQTLVNRFPELKVY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCHHHHHHHHHHHHCCCCEEEE
FNGGFSEAENKRALITPDYFVPAEDDFSVRIFEINYPINFTDLEHRQILGTLVNAGIKRS
ECCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCH
TFGDIVHQAERWQFAVNGELENFFLNEIDRIGKIKVKLIPTSTNDILKVQDDWEPVNQTV
HHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCEEEEEEEECCCCCEEEECCCCCHHHHHH
ASLRMDSIISTGFSISRHRVKELIEKRLVQLNWMIDEKADTLIALNDVISVRKYGRIKLV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEHHHHHHHHHCCCEEEE
DILGKTKKDKLKIQLDIIKTR
EECCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9045828; 9384377 [H]