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The map label for this gene is 116492922

Identifier: 116492922

GI number: 116492922

Start: 1158975

End: 1159190

Strand: Direct

Name: 116492922

Synonym: PEPE_1161

Alternate gene names: NA

Gene position: 1158975-1159190 (Clockwise)

Preceding gene: 116492920

Following gene: 116492923

Centisome position: 63.25

GC content: 36.11

Gene sequence:

>216_bases
ATGATTTTTAAAGTTTATTATCAAGAATCTAAAAAAGAAACACCACGTCGTGAGAATACACACTCACTATTTATTGAAGC
TGAAACGAAGCCAGATGCAATTAAACGCGTCGAAACTAACAATCCAGACTTCAACGTTGAACAAGTCGAATTGCTCGAAG
GTAAGGCACTCGAATATGAACAACAAGGTGTAAATTACAAGCTAGTGGAGTACTAA

Upstream 100 bases:

>100_bases
TAAAATGTTTAAAGATGCGTTGTAGTAATACAACTTATTGAACGGGCAAAACTTTTATTTTTATTTGAACACATTTTTAC
GAAAGAAGGAAGAAAAAAAC

Downstream 100 bases:

>100_bases
GCTTATGGGTAAAATTAACATTAAAAATAACGAGACTGCCGTTTATGCAATCGGTGGCCTTAATGAAATTGGTAAAAATA
CTTATGGTATTCAATTTCAA

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MIFKVYYQESKKETPRRENTHSLFIEAETKPDAIKRVETNNPDFNVEQVELLEGKALEYEQQGVNYKLVEY

Sequences:

>Translated_71_residues
MIFKVYYQESKKETPRRENTHSLFIEAETKPDAIKRVETNNPDFNVEQVELLEGKALEYEQQGVNYKLVEY
>Mature_71_residues
MIFKVYYQESKKETPRRENTHSLFIEAETKPDAIKRVETNNPDFNVEQVELLEGKALEYEQQGVNYKLVEY

Specific function: Unknown

COG id: COG5503

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0356 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009907
- ProDom:   PD055417 [H]

Pfam domain/function: PF07288 DUF1447 [H]

EC number: NA

Molecular weight: Translated: 8470; Mature: 8470

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFKVYYQESKKETPRRENTHSLFIEAETKPDAIKRVETNNPDFNVEQVELLEGKALEYE
CEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCC
QQGVNYKLVEY
CCCCCEEEEEC
>Mature Secondary Structure
MIFKVYYQESKKETPRRENTHSLFIEAETKPDAIKRVETNNPDFNVEQVELLEGKALEYE
CEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCC
QQGVNYKLVEY
CCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA