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The map label for this gene is ybeC [H]

Identifier: 116492816

GI number: 116492816

Start: 1047295

End: 1048800

Strand: Direct

Name: ybeC [H]

Synonym: PEPE_1053

Alternate gene names: 116492816

Gene position: 1047295-1048800 (Clockwise)

Preceding gene: 116492815

Following gene: 116492817

Centisome position: 57.15

GC content: 36.79

Gene sequence:

>1506_bases
ATGGAGGCCGCTTCGGTAGCTGGTCCAGCGGCAATTTTTTCTTGGATAATTGGATTTGTTGTGATTGGTGTAATTGCCTA
TAACTATATTGAGTTAGGGACAATGTTTCCAGAATCTGGCGGAATGAGTAAATTTGCTCAATACAGTCACGGATCATTGG
TTGGCTTTATTGCCTCTTGGGCAAATTGGATTTCTCTAATCACTCTCATCCCCATCGAAGCTGTAGCCGCGGTCCAATAC
ATGAGTTCTTGGCCATGGGCATGGGCGAATTGGACCCATAGTTTTTTCAAAAATGGGAACATCACTACTAGTGGTCTATT
AGTAGTTTTTTGTTTCATTTTAATCTTCACCTTATTAAATTATTGGTCAGTAACTCTATTAACAAGATTTACGAGTTTAA
TCTCCATTTTCAAAATTGCTGTACCTTTAATTACTATTATATTTTTAACTTTAAGTGGCTTTCATCCTGAAAATTACGGA
AAATCACTATCGGAATTTATGCCTTACGGATCAGCTTCGATTTTCGCTGCTACTTCTGCTTCTGGGATTATTTTTTCCTT
TAACGCCTTTCAAACCGTAATTAATATGGGAAATGAAGTCGAAAACCCTAAGAAAAACATTGGGCTAGGTGTAGGGCTTT
CACTCTCAATCAGTGCTGTACTCTACCTAGTTCTACAAAGTACTTTCATCACTTCCGTACCAACTGCACTAATTACTCAA
TCTGGTTGGCATGGAATTAACTTTGAATCACCCTTTGCGGATTTAGCTATCTTACTTGGGATTCATTGGTTATCAGTTTT
ACTTTATTTAGATGCTTTCATTTCACCCTTTGGAACTGGTGTTTCATTTGCTGCTTCAACTGGACGGGCCTTGGCCGCTA
TGTCAAGTAATAATCATTTTCCTAAAATTTTAGGAAGAATTAATGCTAAATATGGGATTCCTCGAGTAGCTATGGCTTTC
AACGCTGTTCTAAGTATGGTAATGGTTTCGATTTTTAGATCATGGGGAACTTTAGCCAGTGTTATTTCGACTTCGACGTT
AATTGCTTACCTGACTGGGCCAATCACGGTCGTATCATTAAGAAAAATGGCTTCCCGTTTCAATCGACCTGTTCGTTTAA
AAGCAATTAAATTTATGGCACCTTTAGCTTTCATTTTAGCTTCTTTAGCTATTTATTGGGCCATGTGGCCAACAACAGTT
GAAGTTATCTTAGTCATTTTACTAGGTTTACCAATTTTTATTTATTACGAATGGCGATTACATTGGAAAGAAACTATGAA
ACAACTACGTAGTAGCCTTTGGCTGATTGTATACTTAATTTTCCTTTCAGTTATGTCGTATATTGGTAGTGATAATTTTA
ATGGTAGAAATTTAATCCATTATCCTCTTGACTTTATAGTTATCATCATTGTGGCATTTATTTTCTACATTTGGGGAATG
CGCAGTCGCATCATAACTGTTTCATTTGGCAACGCCCAAGAGGTTAATAAGCATGTTAAAAAATAA

Upstream 100 bases:

>100_bases
AAAATTAAGGAGGATATTTTTTATTAAAAAACTAAATCTTTTTCAACTGGTAATGCTTGGGCTCGGTTCTCTAATTGGTT
CGGGGTGGCTTTTTGGATCA

Downstream 100 bases:

>100_bases
TTTTCCAAATAAAAAAGGAAACCAATTCACTTACGAATTTGGTCTCCTTTTTTATTGTACTTAGGATAATCATTTATTTA
GCATCTGCATGACTTATCAT

Product: amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MEAASVAGPAAIFSWIIGFVVIGVIAYNYIELGTMFPESGGMSKFAQYSHGSLVGFIASWANWISLITLIPIEAVAAVQY
MSSWPWAWANWTHSFFKNGNITTSGLLVVFCFILIFTLLNYWSVTLLTRFTSLISIFKIAVPLITIIFLTLSGFHPENYG
KSLSEFMPYGSASIFAATSASGIIFSFNAFQTVINMGNEVENPKKNIGLGVGLSLSISAVLYLVLQSTFITSVPTALITQ
SGWHGINFESPFADLAILLGIHWLSVLLYLDAFISPFGTGVSFAASTGRALAAMSSNNHFPKILGRINAKYGIPRVAMAF
NAVLSMVMVSIFRSWGTLASVISTSTLIAYLTGPITVVSLRKMASRFNRPVRLKAIKFMAPLAFILASLAIYWAMWPTTV
EVILVILLGLPIFIYYEWRLHWKETMKQLRSSLWLIVYLIFLSVMSYIGSDNFNGRNLIHYPLDFIVIIIVAFIFYIWGM
RSRIITVSFGNAQEVNKHVKK

Sequences:

>Translated_501_residues
MEAASVAGPAAIFSWIIGFVVIGVIAYNYIELGTMFPESGGMSKFAQYSHGSLVGFIASWANWISLITLIPIEAVAAVQY
MSSWPWAWANWTHSFFKNGNITTSGLLVVFCFILIFTLLNYWSVTLLTRFTSLISIFKIAVPLITIIFLTLSGFHPENYG
KSLSEFMPYGSASIFAATSASGIIFSFNAFQTVINMGNEVENPKKNIGLGVGLSLSISAVLYLVLQSTFITSVPTALITQ
SGWHGINFESPFADLAILLGIHWLSVLLYLDAFISPFGTGVSFAASTGRALAAMSSNNHFPKILGRINAKYGIPRVAMAF
NAVLSMVMVSIFRSWGTLASVISTSTLIAYLTGPITVVSLRKMASRFNRPVRLKAIKFMAPLAFILASLAIYWAMWPTTV
EVILVILLGLPIFIYYEWRLHWKETMKQLRSSLWLIVYLIFLSVMSYIGSDNFNGRNLIHYPLDFIVIIIVAFIFYIWGM
RSRIITVSFGNAQEVNKHVKK
>Mature_501_residues
MEAASVAGPAAIFSWIIGFVVIGVIAYNYIELGTMFPESGGMSKFAQYSHGSLVGFIASWANWISLITLIPIEAVAAVQY
MSSWPWAWANWTHSFFKNGNITTSGLLVVFCFILIFTLLNYWSVTLLTRFTSLISIFKIAVPLITIIFLTLSGFHPENYG
KSLSEFMPYGSASIFAATSASGIIFSFNAFQTVINMGNEVENPKKNIGLGVGLSLSISAVLYLVLQSTFITSVPTALITQ
SGWHGINFESPFADLAILLGIHWLSVLLYLDAFISPFGTGVSFAASTGRALAAMSSNNHFPKILGRINAKYGIPRVAMAF
NAVLSMVMVSIFRSWGTLASVISTSTLIAYLTGPITVVSLRKMASRFNRPVRLKAIKFMAPLAFILASLAIYWAMWPTTV
EVILVILLGLPIFIYYEWRLHWKETMKQLRSSLWLIVYLIFLSVMSYIGSDNFNGRNLIHYPLDFIVIIIVAFIFYIWGM
RSRIITVSFGNAQEVNKHVKK

Specific function: Uptake of an yet unknown amino-acid with the concomitant import of a proton [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]

Homologues:

Organism=Escherichia coli, GI87081869, Length=351, Percent_Identity=23.6467236467236, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI87082250, Length=448, Percent_Identity=23.6607142857143, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17533459, Length=377, Percent_Identity=24.9336870026525, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24667468, Length=385, Percent_Identity=23.3766233766234, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24666159, Length=372, Percent_Identity=23.3870967741935, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221512776, Length=372, Percent_Identity=23.3870967741935, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 55562; Mature: 55562

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAASVAGPAAIFSWIIGFVVIGVIAYNYIELGTMFPESGGMSKFAQYSHGSLVGFIASW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHH
ANWISLITLIPIEAVAAVQYMSSWPWAWANWTHSFFKNGNITTSGLLVVFCFILIFTLLN
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
YWSVTLLTRFTSLISIFKIAVPLITIIFLTLSGFHPENYGKSLSEFMPYGSASIFAATSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHCCCCCCCEEEECCC
SGIIFSFNAFQTVINMGNEVENPKKNIGLGVGLSLSISAVLYLVLQSTFITSVPTALITQ
CCEEEEHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHC
SGWHGINFESPFADLAILLGIHWLSVLLYLDAFISPFGTGVSFAASTGRALAAMSSNNHF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCCH
PKILGRINAKYGIPRVAMAFNAVLSMVMVSIFRSWGTLASVISTSTLIAYLTGPITVVSL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
RKMASRFNRPVRLKAIKFMAPLAFILASLAIYWAMWPTTVEVILVILLGLPIFIYYEWRL
HHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HWKETMKQLRSSLWLIVYLIFLSVMSYIGSDNFNGRNLIHYPLDFIVIIIVAFIFYIWGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCC
RSRIITVSFGNAQEVNKHVKK
CCCEEEEECCCHHHHHHHHCC
>Mature Secondary Structure
MEAASVAGPAAIFSWIIGFVVIGVIAYNYIELGTMFPESGGMSKFAQYSHGSLVGFIASW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHH
ANWISLITLIPIEAVAAVQYMSSWPWAWANWTHSFFKNGNITTSGLLVVFCFILIFTLLN
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
YWSVTLLTRFTSLISIFKIAVPLITIIFLTLSGFHPENYGKSLSEFMPYGSASIFAATSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHCCCCCCCEEEECCC
SGIIFSFNAFQTVINMGNEVENPKKNIGLGVGLSLSISAVLYLVLQSTFITSVPTALITQ
CCEEEEHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHC
SGWHGINFESPFADLAILLGIHWLSVLLYLDAFISPFGTGVSFAASTGRALAAMSSNNHF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCCH
PKILGRINAKYGIPRVAMAFNAVLSMVMVSIFRSWGTLASVISTSTLIAYLTGPITVVSL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
RKMASRFNRPVRLKAIKFMAPLAFILASLAIYWAMWPTTVEVILVILLGLPIFIYYEWRL
HHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HWKETMKQLRSSLWLIVYLIFLSVMSYIGSDNFNGRNLIHYPLDFIVIIIVAFIFYIWGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCC
RSRIITVSFGNAQEVNKHVKK
CCCEEEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12730183 [H]