Click here to switch to the map view.

The map label for this gene is 116492788

Identifier: 116492788

GI number: 116492788

Start: 1024575

End: 1024841

Strand: Direct

Name: 116492788

Synonym: PEPE_1025

Alternate gene names: NA

Gene position: 1024575-1024841 (Clockwise)

Preceding gene: 116492723

Following gene: 116492793

Centisome position: 55.91

GC content: 31.84

Gene sequence:

>267_bases
ATGCAACTTTCCAATGAACAGATAATGAAACTAATTGATAAACATATGGATGCTGTTTGGACTGAAGAATCTATTAAAGC
AGAAATGAAATATGTTGCTTCCAATATCCAAAATTCATCTGATACCCAATTGAACCAAGAACAGATCAATGCCCTTGCTA
ATTCTCTTCAATACATTAACAAGATCACTACGAAGCAAACATTAATCACCCTTTTTAATGTATTTACCGAGATGGGTATT
TTTGTTGATTCAAATGACCAGAATTAA

Upstream 100 bases:

>100_bases
TTCGAAGTCCGCTATTGCCGTAGCGGGCTTTTTATTTTAAATTCTTAATTCTGAACACCTTCTTTCTTGTATAATCGATA
TGAAAGGAGGTGAAATTATT

Downstream 100 bases:

>100_bases
TACTCTCTGCTTTAAGAATATTCATACTAGCATCATTTACTAAGTGCTCCTCGCTACCACAAATAGCGTCGAGTACTTTT
TTAATAGGAATGTTTGGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MQLSNEQIMKLIDKHMDAVWTEESIKAEMKYVASNIQNSSDTQLNQEQINALANSLQYINKITTKQTLITLFNVFTEMGI
FVDSNDQN

Sequences:

>Translated_88_residues
MQLSNEQIMKLIDKHMDAVWTEESIKAEMKYVASNIQNSSDTQLNQEQINALANSLQYINKITTKQTLITLFNVFTEMGI
FVDSNDQN
>Mature_88_residues
MQLSNEQIMKLIDKHMDAVWTEESIKAEMKYVASNIQNSSDTQLNQEQINALANSLQYINKITTKQTLITLFNVFTEMGI
FVDSNDQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10116; Mature: 10116

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSNEQIMKLIDKHMDAVWTEESIKAEMKYVASNIQNSSDTQLNQEQINALANSLQYIN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
KITTKQTLITLFNVFTEMGIFVDSNDQN
HHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQLSNEQIMKLIDKHMDAVWTEESIKAEMKYVASNIQNSSDTQLNQEQINALANSLQYIN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
KITTKQTLITLFNVFTEMGIFVDSNDQN
HHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA