| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492682
Identifier: 116492682
GI number: 116492682
Start: 916673
End: 917626
Strand: Direct
Name: 116492682
Synonym: PEPE_0917
Alternate gene names: NA
Gene position: 916673-917626 (Clockwise)
Preceding gene: 116492681
Following gene: 116492684
Centisome position: 50.03
GC content: 35.12
Gene sequence:
>954_bases ATGGTTGAGGAATTGAAAAAGCTATTTAATAATCGAGGGTTGGTTCTATTTTTATTAGAAGCACTCTTGGTACTGATTGT GATAGTATCGATAATACTAGAAGCAGTAAAAATCAATGACATTCATACTGTTAATGCAATGCGCAGTGACTTTATCGCAA AGCAAAAAAAGGAAGAACGTGCATTTAGTCGTGCCGAAAGAAATCTTATTAAAAAAACTAAAGAAACTACGCCTAAGGTC AATGATGAGAAAGTTTTAAACGGACGGTTAAGTCCTTATCTTGAAAATACTGATGCAGAAGTATCCGTCGCGGTCTATTC AAAAAAGAATAACCGTATTTATCAAACAACTAATAGTAAAAGAACCACTTATCCTTCTGCTAGTATTATTAAAGCCGATT TTTTAGTAGAACTTTTGCATCAGAAACATAAAGCTGGTCAGAGTCTAGATGTTAACGAACAAGCTGTGATCCAAAAGATG ATGGAGTATAGTGACAACGATGCGGCTACTAATGTTTATAATCAAATTGGTGGGTATAGTGGCTTAGCTAGGTACTTTAG TAATGTTGGAATGGATGGATCGGTAGCTTTGACCACTGGATGGGCGTTGACGGCTACGACACCGCTTGATCAAATTAAAA CACTTAATATAATTTTTTATCAAAGCAATTATATTAGTGATACTTCAAGAAGTTATATTGAATATTTGATGGGTCATGTA GCTGAAGACCAAAACTGGGGGATATCAGTCGGTTCTAAGCATTTTTGTTTGAAAAATGGTTGGAAGCAAATGCCAAATGG TAAATGGATTATTAATAGTATGGGACAGATTGGAACTGGTCAGAATAGCTGTACGATTGCGATAATGTCTACTGGAAATA AAACCGAACAAAGTGGAGAAAAATTAGTGGAAGATCTCACTAAGGCGGTTAGTAGCGAACTAAAAATTAAATAA
Upstream 100 bases:
>100_bases AAATTATTTACACTAATCGGGTATATAGTTATAATGTACTGATGTTATATCCGATAAAGTGAGAAGAGTAAATTTAAAGT AGCGAGGCTATACGATACCT
Downstream 100 bases:
>100_bases AAAATAAAAGAAGGACGTCCTTTAGGGATGTCCTTCTTTTATTTTTTATATGTTTAATTGGAGATAGATTCCAAACGGAT TAACCTTGTCCATAGATAAT
Product: Beta-lactamase class A
Products: NA
Alternate protein names: Beta-Lactamase Class A
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MVEELKKLFNNRGLVLFLLEALLVLIVIVSIILEAVKINDIHTVNAMRSDFIAKQKKEERAFSRAERNLIKKTKETTPKV NDEKVLNGRLSPYLENTDAEVSVAVYSKKNNRIYQTTNSKRTTYPSASIIKADFLVELLHQKHKAGQSLDVNEQAVIQKM MEYSDNDAATNVYNQIGGYSGLARYFSNVGMDGSVALTTGWALTATTPLDQIKTLNIIFYQSNYISDTSRSYIEYLMGHV AEDQNWGISVGSKHFCLKNGWKQMPNGKWIINSMGQIGTGQNSCTIAIMSTGNKTEQSGEKLVEDLTKAVSSELKIK
Sequences:
>Translated_317_residues MVEELKKLFNNRGLVLFLLEALLVLIVIVSIILEAVKINDIHTVNAMRSDFIAKQKKEERAFSRAERNLIKKTKETTPKV NDEKVLNGRLSPYLENTDAEVSVAVYSKKNNRIYQTTNSKRTTYPSASIIKADFLVELLHQKHKAGQSLDVNEQAVIQKM MEYSDNDAATNVYNQIGGYSGLARYFSNVGMDGSVALTTGWALTATTPLDQIKTLNIIFYQSNYISDTSRSYIEYLMGHV AEDQNWGISVGSKHFCLKNGWKQMPNGKWIINSMGQIGTGQNSCTIAIMSTGNKTEQSGEKLVEDLTKAVSSELKIK >Mature_317_residues MVEELKKLFNNRGLVLFLLEALLVLIVIVSIILEAVKINDIHTVNAMRSDFIAKQKKEERAFSRAERNLIKKTKETTPKV NDEKVLNGRLSPYLENTDAEVSVAVYSKKNNRIYQTTNSKRTTYPSASIIKADFLVELLHQKHKAGQSLDVNEQAVIQKM MEYSDNDAATNVYNQIGGYSGLARYFSNVGMDGSVALTTGWALTATTPLDQIKTLNIIFYQSNYISDTSRSYIEYLMGHV AEDQNWGISVGSKHFCLKNGWKQMPNGKWIINSMGQIGTGQNSCTIAIMSTGNKTEQSGEKLVEDLTKAVSSELKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35462; Mature: 35462
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEELKKLFNNRGLVLFLLEALLVLIVIVSIILEAVKINDIHTVNAMRSDFIAKQKKEER CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AFSRAERNLIKKTKETTPKVNDEKVLNGRLSPYLENTDAEVSVAVYSKKNNRIYQTTNSK HHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCC RTTYPSASIIKADFLVELLHQKHKAGQSLDVNEQAVIQKMMEYSDNDAATNVYNQIGGYS CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCHH GLARYFSNVGMDGSVALTTGWALTATTPLDQIKTLNIIFYQSNYISDTSRSYIEYLMGHV HHHHHHHHCCCCCCEEEEECEEEEECCCHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHH AEDQNWGISVGSKHFCLKNGWKQMPNGKWIINSMGQIGTGQNSCTIAIMSTGNKTEQSGE CCCCCCCCCCCCCCHHHHCCHHHCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHHHH KLVEDLTKAVSSELKIK HHHHHHHHHHHHCCCCC >Mature Secondary Structure MVEELKKLFNNRGLVLFLLEALLVLIVIVSIILEAVKINDIHTVNAMRSDFIAKQKKEER CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AFSRAERNLIKKTKETTPKVNDEKVLNGRLSPYLENTDAEVSVAVYSKKNNRIYQTTNSK HHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCC RTTYPSASIIKADFLVELLHQKHKAGQSLDVNEQAVIQKMMEYSDNDAATNVYNQIGGYS CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCHH GLARYFSNVGMDGSVALTTGWALTATTPLDQIKTLNIIFYQSNYISDTSRSYIEYLMGHV HHHHHHHHCCCCCCEEEEECEEEEECCCHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHH AEDQNWGISVGSKHFCLKNGWKQMPNGKWIINSMGQIGTGQNSCTIAIMSTGNKTEQSGE CCCCCCCCCCCCCCHHHHCCHHHCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHHHH KLVEDLTKAVSSELKIK HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA