| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is folD
Identifier: 116492584
GI number: 116492584
Start: 823250
End: 824101
Strand: Direct
Name: folD
Synonym: PEPE_0817
Alternate gene names: 116492584
Gene position: 823250-824101 (Clockwise)
Preceding gene: 116492583
Following gene: 116492585
Centisome position: 44.93
GC content: 38.97
Gene sequence:
>852_bases ATGGGCCAAATTATTGATGGAAAAACTTTAGCTGCTGAGATTGATAAACAAACAATGACTGAAGTACAAAAATTGAAAAA TCAAGGTGTCGAACCACATCTTGTTGTGGTTCTAGTTGGTGAAAATCCAGCAAGTCAAATTTACGTAAGAAATAAAGAAA AGCGCGCTAATAAGTTAGGCATTAAATCAACGCTAGTTACGATGAATGCCGATATTAGCGAAAATGAATTGCTCCTAAAA ATCCAAGAATTAAATCAAACCGAAGATGTGAATGCCATTCTGGTCCAAATGCCACTCCCTAAGCATATCGATGCTTTTAA AGTAACGATGGCCATTGATCCGCGTAAGGATGTTGATGGCTTTCATCCAGTTAACGTGGGGAAACTTTTCGAAGGAAAGA CGCAACACACGCCCATTGCATGTACACCGCAAGGAATTATGGAGATGTTCCAAAAATATCATATAGATATTCAAGGTAAG CGTGCAGTAGTGGTGGGACGTAGTTCGATTGTTGGAAAACCAATGGCAGCATTACTATTGAATGCCAACGCAACAGTTAC ATTGGCTCATAGTTATACTAAAAATTTAGCCGCTCTGACTAAAGAAGCAGATATCTTGGTGGTCGCAACAGGTATTGCCC ATTTTATTAAAGAAGATCAGGTTAAAGAAGGTGCAGTTGTTATCGACGTTGGTATGGACCGCGATGAAAATGGTAAACTA ACGGGAGACGTTGATTTCGAGAATGTCGAAAAACATGTTTCATACATCACCCCCGTTCCTAAGGGCGTTGGTCCGATGAC AATATCAATGTTAATGAAACAAACGGTGAATTTAACTAAATGGAGTATTTAA
Upstream 100 bases:
>100_bases TGATATTTACAACCATTTTTAATTTGTTTAAGATTTAAAAAGAAAATGCATCTTATGATATGATTTAAGATGGATAAATA TTTGAAACGGAGGAGTAATA
Downstream 100 bases:
>100_bases ATGCAAGAAGATAAGTATTTAACGGTCAGTGCACTAACCAATTATATTAAACGAAAATTTGATGCTGATCCGTATTTACA TCGCGTTTATTTAGTGGGGG
Product: methenyltetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MGQIIDGKTLAAEIDKQTMTEVQKLKNQGVEPHLVVVLVGENPASQIYVRNKEKRANKLGIKSTLVTMNADISENELLLK IQELNQTEDVNAILVQMPLPKHIDAFKVTMAIDPRKDVDGFHPVNVGKLFEGKTQHTPIACTPQGIMEMFQKYHIDIQGK RAVVVGRSSIVGKPMAALLLNANATVTLAHSYTKNLAALTKEADILVVATGIAHFIKEDQVKEGAVVIDVGMDRDENGKL TGDVDFENVEKHVSYITPVPKGVGPMTISMLMKQTVNLTKWSI
Sequences:
>Translated_283_residues MGQIIDGKTLAAEIDKQTMTEVQKLKNQGVEPHLVVVLVGENPASQIYVRNKEKRANKLGIKSTLVTMNADISENELLLK IQELNQTEDVNAILVQMPLPKHIDAFKVTMAIDPRKDVDGFHPVNVGKLFEGKTQHTPIACTPQGIMEMFQKYHIDIQGK RAVVVGRSSIVGKPMAALLLNANATVTLAHSYTKNLAALTKEADILVVATGIAHFIKEDQVKEGAVVIDVGMDRDENGKL TGDVDFENVEKHVSYITPVPKGVGPMTISMLMKQTVNLTKWSI >Mature_282_residues GQIIDGKTLAAEIDKQTMTEVQKLKNQGVEPHLVVVLVGENPASQIYVRNKEKRANKLGIKSTLVTMNADISENELLLKI QELNQTEDVNAILVQMPLPKHIDAFKVTMAIDPRKDVDGFHPVNVGKLFEGKTQHTPIACTPQGIMEMFQKYHIDIQGKR AVVVGRSSIVGKPMAALLLNANATVTLAHSYTKNLAALTKEADILVVATGIAHFIKEDQVKEGAVVIDVGMDRDENGKLT GDVDFENVEKHVSYITPVPKGVGPMTISMLMKQTVNLTKWSI
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI94721354, Length=289, Percent_Identity=45.6747404844291, Blast_Score=222, Evalue=3e-58, Organism=Homo sapiens, GI222418558, Length=289, Percent_Identity=44.9826989619377, Blast_Score=221, Evalue=5e-58, Organism=Homo sapiens, GI222136639, Length=288, Percent_Identity=42.3611111111111, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI36796743, Length=218, Percent_Identity=24.3119266055046, Blast_Score=73, Evalue=3e-13, Organism=Escherichia coli, GI1786741, Length=275, Percent_Identity=49.4545454545455, Blast_Score=256, Evalue=2e-69, Organism=Caenorhabditis elegans, GI17568735, Length=255, Percent_Identity=42.3529411764706, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6319558, Length=278, Percent_Identity=45.3237410071942, Blast_Score=252, Evalue=4e-68, Organism=Saccharomyces cerevisiae, GI6321643, Length=291, Percent_Identity=39.1752577319588, Blast_Score=216, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6322933, Length=324, Percent_Identity=23.7654320987654, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI62472483, Length=285, Percent_Identity=44.2105263157895, Blast_Score=220, Evalue=8e-58, Organism=Drosophila melanogaster, GI45551871, Length=285, Percent_Identity=44.2105263157895, Blast_Score=220, Evalue=8e-58, Organism=Drosophila melanogaster, GI24645718, Length=285, Percent_Identity=44.2105263157895, Blast_Score=220, Evalue=9e-58, Organism=Drosophila melanogaster, GI17137370, Length=285, Percent_Identity=44.2105263157895, Blast_Score=220, Evalue=9e-58, Organism=Drosophila melanogaster, GI17136818, Length=297, Percent_Identity=44.1077441077441, Blast_Score=216, Evalue=1e-56, Organism=Drosophila melanogaster, GI17136816, Length=297, Percent_Identity=44.1077441077441, Blast_Score=216, Evalue=1e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_PEDPA (Q03FZ5)
Other databases:
- EMBL: CP000422 - RefSeq: YP_804319.1 - ProteinModelPortal: Q03FZ5 - SMR: Q03FZ5 - STRING: Q03FZ5 - GeneID: 4418003 - GenomeReviews: CP000422_GR - KEGG: ppe:PEPE_0817 - NMPDR: fig|278197.10.peg.722 - eggNOG: COG0190 - HOGENOM: HBG328751 - OMA: TYVRNKQ - PhylomeDB: Q03FZ5 - BioCyc: PPEN278197:PEPE_0817-MONOMER - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 31040; Mature: 30908
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQIIDGKTLAAEIDKQTMTEVQKLKNQGVEPHLVVVLVGENPASQIYVRNKEKRANKLG CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCHHHHHHCC IKSTLVTMNADISENELLLKIQELNQTEDVNAILVQMPLPKHIDAFKVTMAIDPRKDVDG CEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCC FHPVNVGKLFEGKTQHTPIACTPQGIMEMFQKYHIDIQGKRAVVVGRSSIVGKPMAALLL CCCCCCCHHCCCCCCCCCEEECHHHHHHHHHHHCCEECCCEEEEEECCCCCCCCHHHEEE NANATVTLAHSYTKNLAALTKEADILVVATGIAHFIKEDQVKEGAVVIDVGMDRDENGKL CCCCEEEEEEHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCEEEEECCCCCCCCCE TGDVDFENVEKHVSYITPVPKGVGPMTISMLMKQTVNLTKWSI EECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEECCC >Mature Secondary Structure GQIIDGKTLAAEIDKQTMTEVQKLKNQGVEPHLVVVLVGENPASQIYVRNKEKRANKLG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCHHHHHHCC IKSTLVTMNADISENELLLKIQELNQTEDVNAILVQMPLPKHIDAFKVTMAIDPRKDVDG CEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCC FHPVNVGKLFEGKTQHTPIACTPQGIMEMFQKYHIDIQGKRAVVVGRSSIVGKPMAALLL CCCCCCCHHCCCCCCCCCEEECHHHHHHHHHHHCCEECCCEEEEEECCCCCCCCHHHEEE NANATVTLAHSYTKNLAALTKEADILVVATGIAHFIKEDQVKEGAVVIDVGMDRDENGKL CCCCEEEEEEHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCEEEEECCCCCCCCCE TGDVDFENVEKHVSYITPVPKGVGPMTISMLMKQTVNLTKWSI EECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA