Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492576

Identifier: 116492576

GI number: 116492576

Start: 819017

End: 819529

Strand: Direct

Name: 116492576

Synonym: PEPE_0809

Alternate gene names: NA

Gene position: 819017-819529 (Clockwise)

Preceding gene: 116492575

Following gene: 116492577

Centisome position: 44.7

GC content: 32.36

Gene sequence:

>513_bases
ATGAAAAAAATTATCTCGGTTTTACTTTCGCTGATGGTAGTAACATTATTTATGAGTGCATGCACCCATAATAAAGTTTA
TGGCACGGTAGTGGTGTCTCCTGAAAAATACAAGCAAATTTCAGCAGATAAGAAGTTGATTGAGAAGACTATCAGTGGTC
TAGAAAAGTTTAATTCTGAAAACCCAGAAACAGAAAAATCAGTGATGAGATCTCTAGATGCTTTGATTAAAAAGGGCCAA
AGGAAAATGAACGATAGTGATCGAGTAAAATTTGAGGCACTTTTAGGCGATCATAAAAATGGAGTTAAAGGGATCGTTAA
GAAAGCTTACACTCATCAACGGGGTTTTGATGATGACTTGAGTGGTAGGATTAGATCAAATATGTTGAAATCAATTAAAT
TAATGACGCATGGAATTACTAAAAACGAAAATGATCGAAAAAAAATATATAAACAAGTTTTAGAAGATACTAAAGCAGAT
AAAAACCTATATAAAATTGGCGGAAATGAATAA

Upstream 100 bases:

>100_bases
ACATTATAAATTAAAGAAATTAAACGGGGTTAAACGCTTTAATTAATTTGAATTATTAGGTATTATTAAATTAGAAGTTA
ACGAATAGAGGGTGGCTTAA

Downstream 100 bases:

>100_bases
AAAATGGGGACAACGAAGTAACATTATTTATATGATGCTTCGTTGTTTTTTGTTGCTTATATTTATGTTAATATACAGTT
CTTAATTATTAGAATATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKKIISVLLSLMVVTLFMSACTHNKVYGTVVVSPEKYKQISADKKLIEKTISGLEKFNSENPETEKSVMRSLDALIKKGQ
RKMNDSDRVKFEALLGDHKNGVKGIVKKAYTHQRGFDDDLSGRIRSNMLKSIKLMTHGITKNENDRKKIYKQVLEDTKAD
KNLYKIGGNE

Sequences:

>Translated_170_residues
MKKIISVLLSLMVVTLFMSACTHNKVYGTVVVSPEKYKQISADKKLIEKTISGLEKFNSENPETEKSVMRSLDALIKKGQ
RKMNDSDRVKFEALLGDHKNGVKGIVKKAYTHQRGFDDDLSGRIRSNMLKSIKLMTHGITKNENDRKKIYKQVLEDTKAD
KNLYKIGGNE
>Mature_170_residues
MKKIISVLLSLMVVTLFMSACTHNKVYGTVVVSPEKYKQISADKKLIEKTISGLEKFNSENPETEKSVMRSLDALIKKGQ
RKMNDSDRVKFEALLGDHKNGVKGIVKKAYTHQRGFDDDLSGRIRSNMLKSIKLMTHGITKNENDRKKIYKQVLEDTKAD
KNLYKIGGNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19293; Mature: 19293

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIISVLLSLMVVTLFMSACTHNKVYGTVVVSPEKYKQISADKKLIEKTISGLEKFNSE
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCC
NPETEKSVMRSLDALIKKGQRKMNDSDRVKFEALLGDHKNGVKGIVKKAYTHQRGFDDDL
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHH
SGRIRSNMLKSIKLMTHGITKNENDRKKIYKQVLEDTKADKNLYKIGGNE
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCC
>Mature Secondary Structure
MKKIISVLLSLMVVTLFMSACTHNKVYGTVVVSPEKYKQISADKKLIEKTISGLEKFNSE
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCC
NPETEKSVMRSLDALIKKGQRKMNDSDRVKFEALLGDHKNGVKGIVKKAYTHQRGFDDDL
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHH
SGRIRSNMLKSIKLMTHGITKNENDRKKIYKQVLEDTKADKNLYKIGGNE
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA