Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492566

Identifier: 116492566

GI number: 116492566

Start: 808875

End: 809639

Strand: Direct

Name: 116492566

Synonym: PEPE_0798

Alternate gene names: NA

Gene position: 808875-809639 (Clockwise)

Preceding gene: 116492565

Following gene: 116492567

Centisome position: 44.14

GC content: 39.08

Gene sequence:

>765_bases
ATGCAGTACGGTTTTAGGGATTTACAGCCAACTAATAAAATTGAATATGAAGATATTCCCACCGAGGGCTTTGTTTTTGG
GGGATTTGACAGTCGTAAAGTTGGGTGGTGGGTAACTTCAAGAGAAGCACCTACACCAGCTGAAAATGAAATAGTAGAAT
CGGTTGCTTACGCGCAAGGCGTCTATGATTTCTCAATGCTGAACGGTGAGCGTTTCTTTGGCAATCGAGAGATTACCTAC
AAAATCGTTATGCCATTAAGCGTCTATCATGAACGAAAAATATTTGAAGAAGAAATTAAGCGACAACTAATGCCGGTTGG
TATTAGTAATCTAGTTGATACGCATGAAGATGGTTACTACTGGAGTGGCAAGTGTAAAAGTGTAGAAGTAGATGACGATG
AAGAAAAAGGAATGTTGACGGCTACGGTGGTATTTGATTGTTACCCATTCGCTTTTACTAATAACTTAGAAGGCGCTGAT
GTTTGGGACGATGTGATATTCGATCATTGGATTTGGCAACCGGTTAAATTTAATATAACGGAATCAATGAATGTAACGCT
TGAAAACATCGGTTCACGACCGGTTATTTGCCATTTTGCAGTAACTGGAAAAGTAACTGTGAAAGGCCCCGGCTTTAATG
GTTATGAATTGACCAAAGATAATGCCGATAAAGCAACGATTACTATGCCGTTAGGTAAAAATAAATTTACGTTAAGTGGT
TCTGGAACGATTGAGTTTAAGTTTAGACGTGAGGAGATGATCTAA

Upstream 100 bases:

>100_bases
ATCTTTACATGGATAGCGATACATTGGTTGGCACTACATCTGATAAATTCAACGGACAATTAGGAGCAACTTCCAATAAC
AACGAAAGGTGGAGCTGGTA

Downstream 100 bases:

>100_bases
TGTATCGAGTGATTGCTTATGACGAACCAACCGACAAAGCTGGTTACGTTATCCATGACCCTGTTGTTGGTTTGGCAGCG
TCAGAAGGTAAATTAACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage-Related Protein

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MQYGFRDLQPTNKIEYEDIPTEGFVFGGFDSRKVGWWVTSREAPTPAENEIVESVAYAQGVYDFSMLNGERFFGNREITY
KIVMPLSVYHERKIFEEEIKRQLMPVGISNLVDTHEDGYYWSGKCKSVEVDDDEEKGMLTATVVFDCYPFAFTNNLEGAD
VWDDVIFDHWIWQPVKFNITESMNVTLENIGSRPVICHFAVTGKVTVKGPGFNGYELTKDNADKATITMPLGKNKFTLSG
SGTIEFKFRREEMI

Sequences:

>Translated_254_residues
MQYGFRDLQPTNKIEYEDIPTEGFVFGGFDSRKVGWWVTSREAPTPAENEIVESVAYAQGVYDFSMLNGERFFGNREITY
KIVMPLSVYHERKIFEEEIKRQLMPVGISNLVDTHEDGYYWSGKCKSVEVDDDEEKGMLTATVVFDCYPFAFTNNLEGAD
VWDDVIFDHWIWQPVKFNITESMNVTLENIGSRPVICHFAVTGKVTVKGPGFNGYELTKDNADKATITMPLGKNKFTLSG
SGTIEFKFRREEMI
>Mature_254_residues
MQYGFRDLQPTNKIEYEDIPTEGFVFGGFDSRKVGWWVTSREAPTPAENEIVESVAYAQGVYDFSMLNGERFFGNREITY
KIVMPLSVYHERKIFEEEIKRQLMPVGISNLVDTHEDGYYWSGKCKSVEVDDDEEKGMLTATVVFDCYPFAFTNNLEGAD
VWDDVIFDHWIWQPVKFNITESMNVTLENIGSRPVICHFAVTGKVTVKGPGFNGYELTKDNADKATITMPLGKNKFTLSG
SGTIEFKFRREEMI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29079; Mature: 29079

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYGFRDLQPTNKIEYEDIPTEGFVFGGFDSRKVGWWVTSREAPTPAENEIVESVAYAQG
CCCCCCCCCCCCCEECCCCCCCCEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHC
VYDFSMLNGERFFGNREITYKIVMPLSVYHERKIFEEEIKRQLMPVGISNLVDTHEDGYY
CEEEEEECCEEEECCCEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEE
WSGKCKSVEVDDDEEKGMLTATVVFDCYPFAFTNNLEGADVWDDVIFDHWIWQPVKFNIT
ECCEEEEEECCCCCCCCEEEEEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEE
ESMNVTLENIGSRPVICHFAVTGKVTVKGPGFNGYELTKDNADKATITMPLGKNKFTLSG
CCCEEEEECCCCCCEEEEEEEEEEEEEECCCCCCEEECCCCCCCEEEEEECCCCEEEECC
SGTIEFKFRREEMI
CCEEEEEEECCCCC
>Mature Secondary Structure
MQYGFRDLQPTNKIEYEDIPTEGFVFGGFDSRKVGWWVTSREAPTPAENEIVESVAYAQG
CCCCCCCCCCCCCEECCCCCCCCEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHC
VYDFSMLNGERFFGNREITYKIVMPLSVYHERKIFEEEIKRQLMPVGISNLVDTHEDGYY
CEEEEEECCEEEECCCEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEE
WSGKCKSVEVDDDEEKGMLTATVVFDCYPFAFTNNLEGADVWDDVIFDHWIWQPVKFNIT
ECCEEEEEECCCCCCCCEEEEEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEE
ESMNVTLENIGSRPVICHFAVTGKVTVKGPGFNGYELTKDNADKATITMPLGKNKFTLSG
CCCEEEEECCCCCCEEEEEEEEEEEEEECCCCCCEEECCCCCCCEEEEEECCCCEEEECC
SGTIEFKFRREEMI
CCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA