Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492561

Identifier: 116492561

GI number: 116492561

Start: 804026

End: 804610

Strand: Direct

Name: 116492561

Synonym: PEPE_0793

Alternate gene names: NA

Gene position: 804026-804610 (Clockwise)

Preceding gene: 116492560

Following gene: 116492562

Centisome position: 43.88

GC content: 41.2

Gene sequence:

>585_bases
ATGGCAACAGAAGTTATCCAAGGTAACAACTTAAAAGTATTTTATAGATTAAAGAAGTGGGCCAAAGAACGTCCAGCAGA
ATTGGTGCCTTATCAAACTTCGGCAAAATTAACGTTTAAGCGGGATTCGGATTCCACGAAAACTAAGGATGGTAATGTAG
CGACTAGTGCCAGTCTTGAACCTGAATTAGAAGTAGAATTTATCAATAATAGTTCGATAGCAGCCGATGAATTCTACCAG
AGTGTACTGAACAATGAGGAGGGGGAAGCATGGTTAGTTGATATTGATCGTCTCAATAAAGCTGGTAAAAATTTTGCTTG
GTACATGCAAGTTACCGTTTCTGAAGATGAAACCGAAGCTAAAACTGGTGATGCCTCTGAACGCTCTATTACATTTGCTG
TCAGTGGACAACCCAAACGGGGCTGGTTAGCTCTTACTCAAGATCAGCAAGACCAGGTAGATTATATTTTCCGTGGTACA
GATAAAGTTGTCATGGCTGATGATGGCACCGAAGAAAACGGTGGAACTGCTTGGGAAGATGGAGATGAGGGTACATATGT
ACCTAAAGACGACTCGTCAAAATAG

Upstream 100 bases:

>100_bases
AGCAGTCAAAGCGAATGCAACTAGATACTAGCGTACCTAACTCAACACTAATGCGAGGAATGGTAACAATCGAATTACAA
ATATTATAAGGAGTGAAAAT

Downstream 100 bases:

>100_bases
ACAGCCCCGTAGGTATCAATGTAAAACCTACGAATAATGGGGCACTTATAAATTCTAATTAAAAGGAGAATGCATTATGG
CAGATCGTACGAAACAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: Tail 2 Family Protein; Phage Tail Protein; Phage Tail

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MATEVIQGNNLKVFYRLKKWAKERPAELVPYQTSAKLTFKRDSDSTKTKDGNVATSASLEPELEVEFINNSSIAADEFYQ
SVLNNEEGEAWLVDIDRLNKAGKNFAWYMQVTVSEDETEAKTGDASERSITFAVSGQPKRGWLALTQDQQDQVDYIFRGT
DKVVMADDGTEENGGTAWEDGDEGTYVPKDDSSK

Sequences:

>Translated_194_residues
MATEVIQGNNLKVFYRLKKWAKERPAELVPYQTSAKLTFKRDSDSTKTKDGNVATSASLEPELEVEFINNSSIAADEFYQ
SVLNNEEGEAWLVDIDRLNKAGKNFAWYMQVTVSEDETEAKTGDASERSITFAVSGQPKRGWLALTQDQQDQVDYIFRGT
DKVVMADDGTEENGGTAWEDGDEGTYVPKDDSSK
>Mature_193_residues
ATEVIQGNNLKVFYRLKKWAKERPAELVPYQTSAKLTFKRDSDSTKTKDGNVATSASLEPELEVEFINNSSIAADEFYQS
VLNNEEGEAWLVDIDRLNKAGKNFAWYMQVTVSEDETEAKTGDASERSITFAVSGQPKRGWLALTQDQQDQVDYIFRGTD
KVVMADDGTEENGGTAWEDGDEGTYVPKDDSSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21670; Mature: 21539

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATEVIQGNNLKVFYRLKKWAKERPAELVPYQTSAKLTFKRDSDSTKTKDGNVATSASLE
CCCCEEECCCEEEEEEEHHHHHCCCCEECCCCCCCEEEEEECCCCCCCCCCCEEECCCCC
PELEVEFINNSSIAADEFYQSVLNNEEGEAWLVDIDRLNKAGKNFAWYMQVTVSEDETEA
CCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCEEEEEEEEECCCCCCC
KTGDASERSITFAVSGQPKRGWLALTQDQQDQVDYIFRGTDKVVMADDGTEENGGTAWED
CCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCC
GDEGTYVPKDDSSK
CCCCCCCCCCCCCC
>Mature Secondary Structure 
ATEVIQGNNLKVFYRLKKWAKERPAELVPYQTSAKLTFKRDSDSTKTKDGNVATSASLE
CCCEEECCCEEEEEEEHHHHHCCCCEECCCCCCCEEEEEECCCCCCCCCCCEEECCCCC
PELEVEFINNSSIAADEFYQSVLNNEEGEAWLVDIDRLNKAGKNFAWYMQVTVSEDETEA
CCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCEEEEEEEEECCCCCCC
KTGDASERSITFAVSGQPKRGWLALTQDQQDQVDYIFRGTDKVVMADDGTEENGGTAWED
CCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCC
GDEGTYVPKDDSSK
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA