| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492561
Identifier: 116492561
GI number: 116492561
Start: 804026
End: 804610
Strand: Direct
Name: 116492561
Synonym: PEPE_0793
Alternate gene names: NA
Gene position: 804026-804610 (Clockwise)
Preceding gene: 116492560
Following gene: 116492562
Centisome position: 43.88
GC content: 41.2
Gene sequence:
>585_bases ATGGCAACAGAAGTTATCCAAGGTAACAACTTAAAAGTATTTTATAGATTAAAGAAGTGGGCCAAAGAACGTCCAGCAGA ATTGGTGCCTTATCAAACTTCGGCAAAATTAACGTTTAAGCGGGATTCGGATTCCACGAAAACTAAGGATGGTAATGTAG CGACTAGTGCCAGTCTTGAACCTGAATTAGAAGTAGAATTTATCAATAATAGTTCGATAGCAGCCGATGAATTCTACCAG AGTGTACTGAACAATGAGGAGGGGGAAGCATGGTTAGTTGATATTGATCGTCTCAATAAAGCTGGTAAAAATTTTGCTTG GTACATGCAAGTTACCGTTTCTGAAGATGAAACCGAAGCTAAAACTGGTGATGCCTCTGAACGCTCTATTACATTTGCTG TCAGTGGACAACCCAAACGGGGCTGGTTAGCTCTTACTCAAGATCAGCAAGACCAGGTAGATTATATTTTCCGTGGTACA GATAAAGTTGTCATGGCTGATGATGGCACCGAAGAAAACGGTGGAACTGCTTGGGAAGATGGAGATGAGGGTACATATGT ACCTAAAGACGACTCGTCAAAATAG
Upstream 100 bases:
>100_bases AGCAGTCAAAGCGAATGCAACTAGATACTAGCGTACCTAACTCAACACTAATGCGAGGAATGGTAACAATCGAATTACAA ATATTATAAGGAGTGAAAAT
Downstream 100 bases:
>100_bases ACAGCCCCGTAGGTATCAATGTAAAACCTACGAATAATGGGGCACTTATAAATTCTAATTAAAAGGAGAATGCATTATGG CAGATCGTACGAAACAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: Tail 2 Family Protein; Phage Tail Protein; Phage Tail
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MATEVIQGNNLKVFYRLKKWAKERPAELVPYQTSAKLTFKRDSDSTKTKDGNVATSASLEPELEVEFINNSSIAADEFYQ SVLNNEEGEAWLVDIDRLNKAGKNFAWYMQVTVSEDETEAKTGDASERSITFAVSGQPKRGWLALTQDQQDQVDYIFRGT DKVVMADDGTEENGGTAWEDGDEGTYVPKDDSSK
Sequences:
>Translated_194_residues MATEVIQGNNLKVFYRLKKWAKERPAELVPYQTSAKLTFKRDSDSTKTKDGNVATSASLEPELEVEFINNSSIAADEFYQ SVLNNEEGEAWLVDIDRLNKAGKNFAWYMQVTVSEDETEAKTGDASERSITFAVSGQPKRGWLALTQDQQDQVDYIFRGT DKVVMADDGTEENGGTAWEDGDEGTYVPKDDSSK >Mature_193_residues ATEVIQGNNLKVFYRLKKWAKERPAELVPYQTSAKLTFKRDSDSTKTKDGNVATSASLEPELEVEFINNSSIAADEFYQS VLNNEEGEAWLVDIDRLNKAGKNFAWYMQVTVSEDETEAKTGDASERSITFAVSGQPKRGWLALTQDQQDQVDYIFRGTD KVVMADDGTEENGGTAWEDGDEGTYVPKDDSSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21670; Mature: 21539
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATEVIQGNNLKVFYRLKKWAKERPAELVPYQTSAKLTFKRDSDSTKTKDGNVATSASLE CCCCEEECCCEEEEEEEHHHHHCCCCEECCCCCCCEEEEEECCCCCCCCCCCEEECCCCC PELEVEFINNSSIAADEFYQSVLNNEEGEAWLVDIDRLNKAGKNFAWYMQVTVSEDETEA CCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCEEEEEEEEECCCCCCC KTGDASERSITFAVSGQPKRGWLALTQDQQDQVDYIFRGTDKVVMADDGTEENGGTAWED CCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCC GDEGTYVPKDDSSK CCCCCCCCCCCCCC >Mature Secondary Structure ATEVIQGNNLKVFYRLKKWAKERPAELVPYQTSAKLTFKRDSDSTKTKDGNVATSASLE CCCEEECCCEEEEEEEHHHHHCCCCEECCCCCCCEEEEEECCCCCCCCCCCEEECCCCC PELEVEFINNSSIAADEFYQSVLNNEEGEAWLVDIDRLNKAGKNFAWYMQVTVSEDETEA CCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCEEEEEEEEECCCCCCC KTGDASERSITFAVSGQPKRGWLALTQDQQDQVDYIFRGTDKVVMADDGTEENGGTAWED CCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCC GDEGTYVPKDDSSK CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA