| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492552
Identifier: 116492552
GI number: 116492552
Start: 799459
End: 800424
Strand: Direct
Name: 116492552
Synonym: PEPE_0784
Alternate gene names: NA
Gene position: 799459-800424 (Clockwise)
Preceding gene: 116492551
Following gene: 116492553
Centisome position: 43.63
GC content: 38.2
Gene sequence:
>966_bases ATGGTAAAGCGGAAGAATAGTGATGATTATTGGAAACAACGTGAAGCCGATGAACGGAAGTGGATTGAATCTAATATCAA GAGCGGCAAAGACTTTGATAGATTAATTCAAGAGCATTATGACACTTTGCTACAGAGTATTAATAAAGATATTAGTGATC AATACACTCACTATGCTAAACGTGAAGGTTACACTCTTGCAGAAGCTCGCAAGAAAGTATCGGAAGAAGATGTTAAGGCA TTCTCAAATGAAGCTAAGAGGCTTGTAGCTAAAGCTAGGACGATTTACAAAAAGAAAGGCAAAGTAGAGTATGCAGACTT TTCAGACGAAGTTAACACCCGATTAAGACTGTATAACGCTACTATGCGTATCAATCGTCTTGAGATGTTAAAGGCTCAAA TCGGACTAGAAATGATAGATAACAATATGGATATCTATAGCGCTGTAGCCGATCATTTAAACGATAAATACATTAACGAG TTGGAACGGCAAGCTGGTATATTAGCAGATTCAGCAAGCAACGTTAAAGCAGCAGTTACCGCTAGTATCGTTATGGCAAC AACTGGTAATGCTAATTTTAGTGAAAGATTGTGGGCTAATAGCGATGTGTTCAAAGCGAGACTTGACCAATTACTAACTA AACAAATGGTACAAGGCTTGAATCCGACAGTAATTGCACGTGATTTAAAGCCTTATCTCAAAGACGAGGTAAAGAATGCT AGGTATGTTACTGAACGATTAGCACGAACAGAAACGTCAAGAGTGCAAGCACAAGCACAACTGAACAGCTTTAGAAAGTA TGGATATAAATATGCTAAATGGATTGCTGAACCATCAGCTTGTAAGGTGTGTGCTTCTATAGCAACAACAAACGATGGAA TTTATACAGTAAATGATGTTCCAACGCAACCGGTACATCCAAACTGTATGTGTAGTATTTCAGCATGGTATGACGAGGAG GAATAA
Upstream 100 bases:
>100_bases AACGAGATTAAACGCATGAAAGAGGAGCAAAAGGAACAAATTAAAAGTTCACTTGAAGCCACTGACAACCTAACTGACCA ACAGAAAGCTGGTGTAGGCA
Downstream 100 bases:
>100_bases GTATGGAGCTACCCATTGATAACGAAACATTAATTGGTGCCTTAGAAGAAATTGTAAATAATTTAAAGAAACGCAATAAA GATGTTGAACATATTAAGAT
Product: Phage Mu protein F like protein
Products: NA
Alternate protein names: Phage Protein; Phage Head Morphogenesis Protein
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MVKRKNSDDYWKQREADERKWIESNIKSGKDFDRLIQEHYDTLLQSINKDISDQYTHYAKREGYTLAEARKKVSEEDVKA FSNEAKRLVAKARTIYKKKGKVEYADFSDEVNTRLRLYNATMRINRLEMLKAQIGLEMIDNNMDIYSAVADHLNDKYINE LERQAGILADSASNVKAAVTASIVMATTGNANFSERLWANSDVFKARLDQLLTKQMVQGLNPTVIARDLKPYLKDEVKNA RYVTERLARTETSRVQAQAQLNSFRKYGYKYAKWIAEPSACKVCASIATTNDGIYTVNDVPTQPVHPNCMCSISAWYDEE E
Sequences:
>Translated_321_residues MVKRKNSDDYWKQREADERKWIESNIKSGKDFDRLIQEHYDTLLQSINKDISDQYTHYAKREGYTLAEARKKVSEEDVKA FSNEAKRLVAKARTIYKKKGKVEYADFSDEVNTRLRLYNATMRINRLEMLKAQIGLEMIDNNMDIYSAVADHLNDKYINE LERQAGILADSASNVKAAVTASIVMATTGNANFSERLWANSDVFKARLDQLLTKQMVQGLNPTVIARDLKPYLKDEVKNA RYVTERLARTETSRVQAQAQLNSFRKYGYKYAKWIAEPSACKVCASIATTNDGIYTVNDVPTQPVHPNCMCSISAWYDEE E >Mature_321_residues MVKRKNSDDYWKQREADERKWIESNIKSGKDFDRLIQEHYDTLLQSINKDISDQYTHYAKREGYTLAEARKKVSEEDVKA FSNEAKRLVAKARTIYKKKGKVEYADFSDEVNTRLRLYNATMRINRLEMLKAQIGLEMIDNNMDIYSAVADHLNDKYINE LERQAGILADSASNVKAAVTASIVMATTGNANFSERLWANSDVFKARLDQLLTKQMVQGLNPTVIARDLKPYLKDEVKNA RYVTERLARTETSRVQAQAQLNSFRKYGYKYAKWIAEPSACKVCASIATTNDGIYTVNDVPTQPVHPNCMCSISAWYDEE E
Specific function: Unknown
COG id: COG5585
COG function: function code T; NAD+--asparagine ADP-ribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36876; Mature: 36876
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKRKNSDDYWKQREADERKWIESNIKSGKDFDRLIQEHYDTLLQSINKDISDQYTHYAK CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH REGYTLAEARKKVSEEDVKAFSNEAKRLVAKARTIYKKKGKVEYADFSDEVNTRLRLYNA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHEEHH TMRINRLEMLKAQIGLEMIDNNMDIYSAVADHLNDKYINELERQAGILADSASNVKAAVT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHH ASIVMATTGNANFSERLWANSDVFKARLDQLLTKQMVQGLNPTVIARDLKPYLKDEVKNA HEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH RYVTERLARTETSRVQAQAQLNSFRKYGYKYAKWIAEPSACKVCASIATTNDGIYTVNDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCC PTQPVHPNCMCSISAWYDEEE CCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure MVKRKNSDDYWKQREADERKWIESNIKSGKDFDRLIQEHYDTLLQSINKDISDQYTHYAK CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH REGYTLAEARKKVSEEDVKAFSNEAKRLVAKARTIYKKKGKVEYADFSDEVNTRLRLYNA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHEEHH TMRINRLEMLKAQIGLEMIDNNMDIYSAVADHLNDKYINELERQAGILADSASNVKAAVT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHH ASIVMATTGNANFSERLWANSDVFKARLDQLLTKQMVQGLNPTVIARDLKPYLKDEVKNA HEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH RYVTERLARTETSRVQAQAQLNSFRKYGYKYAKWIAEPSACKVCASIATTNDGIYTVNDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCC PTQPVHPNCMCSISAWYDEEE CCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA